| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934814
Identifier: 187934814
GI number: 187934814
Start: 2019801
End: 2020706
Strand: Reverse
Name: 187934814
Synonym: CLL_A1941
Alternate gene names: NA
Gene position: 2020706-2019801 (Counterclockwise)
Preceding gene: 187934182
Following gene: 187935704
Centisome position: 53.17
GC content: 28.81
Gene sequence:
>906_bases ATGAAAGAATTAGAAGTAAATAAACAATTGCCAGTTATTAAAACAAATTATGAAGATGTAAAAGCATCTTTAAGTGAAAC AATGAACAAATATAAAGGATTAGTTGTTACTGAGGAGAGCCTTCAAGATTGCAAGGCTACTCAAAAGGAACTTGCAGGAC TTAGAAATAAGATTGATGGATTTAGAAAAACAGTAAAAAAAGAAATGGAAGTACCTATTAAGAGCTTTGAAAGTAATTGT AAAGAATTAATAGGACTTATAGCAGATACAGAGCAACCTATTAAGGATGGAATAAATGTTTTTGATAACAAACGTAGAGA GGAAAAGAAACATCAAGCAGAAGAGCTTATAAAGACTTATGTATTAGAACTTGAACTAGATGAAAAGTATTCAAAACAAT TAACTGTAATAGATAAATATTTAAATTTATCAGTTAGTAAAAAAAGTGTTAAGGAAGATATTTGTTCAAGGGCAGGAGCG TTAAAGTTACAACAGGATGCAGAGATAAGGGAGCTAGAACAATTAAAGGCTAGTATTGATGTTTATGTTAATGCTGCTAA TGCAGATATAAATACAAAATTAAAAGCTGATGATTTTTACAAATATATTAAATATGGACATGACATAACAAGAATTTCAG CTCTAATAAAAGAACAACATGACAAAATTAAAGAAGCTGAAAACCCAAAACCAATTGAGCAACCTAAAGAAGAAAAAACT GTAGAGCCAATTAAGCAGGAAGTATCTATTCCAATAGATACTAAACAACCATCAAAAGAAGAAAAATTTTATTTCTATGA GCTAAAAGTAATTGCTAATAAGGAAAATATGCTTGAGTTAAATAAGCTTCTAAAAACTCCAGGATTTAAATATGAAGTGG TAAGTCAAGGAATAGTTAATAAGTAG
Upstream 100 bases:
>100_bases ATGAGTCAATTAAATAAGAAAAAGGATGCCATGCAAAAGGCAACTCAAAAAAGTAAAAATGAATTTCCAGAAGAATTAAA TTTATAGGGGTGTATTGAGA
Downstream 100 bases:
>100_bases GTGATTTCATGAATGAAGGGTGGATAAAACTTCATAGATGTTTATTTGAAAAAGCTATATGGCAAAATTCTACAGTAGAG CATAAGGTTATTCTTATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKELEVNKQLPVIKTNYEDVKASLSETMNKYKGLVVTEESLQDCKATQKELAGLRNKIDGFRKTVKKEMEVPIKSFESNC KELIGLIADTEQPIKDGINVFDNKRREEKKHQAEELIKTYVLELELDEKYSKQLTVIDKYLNLSVSKKSVKEDICSRAGA LKLQQDAEIRELEQLKASIDVYVNAANADINTKLKADDFYKYIKYGHDITRISALIKEQHDKIKEAENPKPIEQPKEEKT VEPIKQEVSIPIDTKQPSKEEKFYFYELKVIANKENMLELNKLLKTPGFKYEVVSQGIVNK
Sequences:
>Translated_301_residues MKELEVNKQLPVIKTNYEDVKASLSETMNKYKGLVVTEESLQDCKATQKELAGLRNKIDGFRKTVKKEMEVPIKSFESNC KELIGLIADTEQPIKDGINVFDNKRREEKKHQAEELIKTYVLELELDEKYSKQLTVIDKYLNLSVSKKSVKEDICSRAGA LKLQQDAEIRELEQLKASIDVYVNAANADINTKLKADDFYKYIKYGHDITRISALIKEQHDKIKEAENPKPIEQPKEEKT VEPIKQEVSIPIDTKQPSKEEKFYFYELKVIANKENMLELNKLLKTPGFKYEVVSQGIVNK >Mature_301_residues MKELEVNKQLPVIKTNYEDVKASLSETMNKYKGLVVTEESLQDCKATQKELAGLRNKIDGFRKTVKKEMEVPIKSFESNC KELIGLIADTEQPIKDGINVFDNKRREEKKHQAEELIKTYVLELELDEKYSKQLTVIDKYLNLSVSKKSVKEDICSRAGA LKLQQDAEIRELEQLKASIDVYVNAANADINTKLKADDFYKYIKYGHDITRISALIKEQHDKIKEAENPKPIEQPKEEKT VEPIKQEVSIPIDTKQPSKEEKFYFYELKVIANKENMLELNKLLKTPGFKYEVVSQGIVNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34719; Mature: 34719
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELEVNKQLPVIKTNYEDVKASLSETMNKYKGLVVTEESLQDCKATQKELAGLRNKIDG CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHH FRKTVKKEMEVPIKSFESNCKELIGLIADTEQPIKDGINVFDNKRREEKKHQAEELIKTY HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHH VLELELDEKYSKQLTVIDKYLNLSVSKKSVKEDICSRAGALKLQQDAEIRELEQLKASID HHHCEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH VYVNAANADINTKLKADDFYKYIKYGHDITRISALIKEQHDKIKEAENPKPIEQPKEEKT EEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VEPIKQEVSIPIDTKQPSKEEKFYFYELKVIANKENMLELNKLLKTPGFKYEVVSQGIVN HHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCHHHHCCCCC K C >Mature Secondary Structure MKELEVNKQLPVIKTNYEDVKASLSETMNKYKGLVVTEESLQDCKATQKELAGLRNKIDG CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHH FRKTVKKEMEVPIKSFESNCKELIGLIADTEQPIKDGINVFDNKRREEKKHQAEELIKTY HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHH VLELELDEKYSKQLTVIDKYLNLSVSKKSVKEDICSRAGALKLQQDAEIRELEQLKASID HHHCEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH VYVNAANADINTKLKADDFYKYIKYGHDITRISALIKEQHDKIKEAENPKPIEQPKEEKT EEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VEPIKQEVSIPIDTKQPSKEEKFYFYELKVIANKENMLELNKLLKTPGFKYEVVSQGIVN HHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCHHHHCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA