| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is aroK [H]
Identifier: 187934749
GI number: 187934749
Start: 3247812
End: 3248309
Strand: Reverse
Name: aroK [H]
Synonym: CLL_A3138
Alternate gene names: 187934749
Gene position: 3248309-3247812 (Counterclockwise)
Preceding gene: 187932786
Following gene: 187935030
Centisome position: 85.47
GC content: 24.9
Gene sequence:
>498_bases ATGAAAAATAAGATATTTTTAATAGGAATGCCTGGATGTGGAAAATCTACAATTGGAGAAATTATAGCCAAAGAATTAAT GTTAAAGTTTATAGATATGGATATATGTATTGAAGAGAAAACATCAAAAACAATTTCAGAGCTTTTTGAACAAGGTGAAG ATTATTTTAGAGATATAGAAAGTGAAACTTGTAAGGAAATAATAAAATATGATAATGTTGTAATAGCAACTGGTGGTGGA GTAGTAAAAAAAGATATAAATATAGAAACTTTAAAGAACAATGGATTAGTGATTTTTATTGATAGGCCAGTTGAAAAAAT TATTTCTGATATAGATGTTTCTAGAAGGCCTCTTTTAAAAAATGGAAAAGAGAGAATTATAGGATTATATAAAGAAAGAT ATGATATTTATAAGAAAGCATGTCATAAGATAGTTGTTAATGGTAGTACTATAGATGAAGTTGTAGGAGAAATAAAAAAA ATAATTATTAATAACTAG
Upstream 100 bases:
>100_bases AAGTCATCAGAAATTTGGCATGATATATCTATAAATTCTGATATACAAGAGAAAATATATTCATATATAGATGAAGAATT TAGATAGAGGAGATTATATT
Downstream 100 bases:
>100_bases AATTTAATGTTTATATTTTATGAAGGATAGTAGCATAGTAGAATTAAAAAAAAATTATTTGAAGTACAGGAGGAGTTTTA AAATGATTATTATTATGAAA
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKNKIFLIGMPGCGKSTIGEIIAKELMLKFIDMDICIEEKTSKTISELFEQGEDYFRDIESETCKEIIKYDNVVIATGGG VVKKDINIETLKNNGLVIFIDRPVEKIISDIDVSRRPLLKNGKERIIGLYKERYDIYKKACHKIVVNGSTIDEVVGEIKK IIINN
Sequences:
>Translated_165_residues MKNKIFLIGMPGCGKSTIGEIIAKELMLKFIDMDICIEEKTSKTISELFEQGEDYFRDIESETCKEIIKYDNVVIATGGG VVKKDINIETLKNNGLVIFIDRPVEKIISDIDVSRRPLLKNGKERIIGLYKERYDIYKKACHKIVVNGSTIDEVVGEIKK IIINN >Mature_165_residues MKNKIFLIGMPGCGKSTIGEIIAKELMLKFIDMDICIEEKTSKTISELFEQGEDYFRDIESETCKEIIKYDNVVIATGGG VVKKDINIETLKNNGLVIFIDRPVEKIISDIDVSRRPLLKNGKERIIGLYKERYDIYKKACHKIVVNGSTIDEVVGEIKK IIINN
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786587, Length=169, Percent_Identity=30.1775147928994, Blast_Score=90, Evalue=6e-20, Organism=Escherichia coli, GI87082255, Length=143, Percent_Identity=34.965034965035, Blast_Score=84, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 18714; Mature: 18714
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKIFLIGMPGCGKSTIGEIIAKELMLKFIDMDICIEEKTSKTISELFEQGEDYFRDIE CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHCCHHHHHHHH SETCKEIIKYDNVVIATGGGVVKKDINIETLKNNGLVIFIDRPVEKIISDIDVSRRPLLK HHHHHHHHHHCCEEEEECCCEEEECCCEEEECCCCEEEEECCCHHHHHHHCCCCCCCHHH NGKERIIGLYKERYDIYKKACHKIVVNGSTIDEVVGEIKKIIINN CCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNKIFLIGMPGCGKSTIGEIIAKELMLKFIDMDICIEEKTSKTISELFEQGEDYFRDIE CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHCCHHHHHHHH SETCKEIIKYDNVVIATGGGVVKKDINIETLKNNGLVIFIDRPVEKIISDIDVSRRPLLK HHHHHHHHHHCCEEEEECCCEEEECCCEEEECCCCEEEEECCCHHHHHHHCCCCCCCHHH NGKERIIGLYKERYDIYKKACHKIVVNGSTIDEVVGEIKKIIINN CCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA