| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is yyaC [H]
Identifier: 187934719
GI number: 187934719
Start: 505148
End: 505666
Strand: Reverse
Name: yyaC [H]
Synonym: CLL_A0506
Alternate gene names: 187934719
Gene position: 505666-505148 (Counterclockwise)
Preceding gene: 187932624
Following gene: 187935142
Centisome position: 13.31
GC content: 30.83
Gene sequence:
>519_bases TTGACTAAGCATAAAGTAAATTACAAATCAGCAGATGCCTGTTTTGAGATATCTGAATCAATTAAAGATTATCTTAATGA TGAAACAATAATAGTCTGTATCGGTACTGATAAATGTATTGGTGATTGTTTAGGTCCTTTAGTAGGGTCAATTTTAAAAG ATAGCTCATTTGAATTACCTGTATATGGTACGCTTTCAAGTCCTATACACGCTTTAAATATAGATGATCGACTAGAAGAA ATATACGAAAAACATCCTGATTCTCCAATAATAGGAGTAGATGCATGCCTAGGTAATAAAGATGCTATTGGAGAAATTCA CACTAGAGATTATGCTATACATCCCGGAAAAGGTGTTGGTAAAGAGTTACCTGAAGTTGGTATAGCTTCAATAATTGGTA TAATTGATACTGTTAATAACTCTGAAGTATTCTCTTCTTACAGTATAAGACTTTCTTTAGTTATGGATATGGCTAAATTA ATATCAAAAGCTTTAATCGACGCATATAATAAAAAATAA
Upstream 100 bases:
>100_bases CTCATTCTAATATTTTCCACTTTATTTTTTTTTATACTTTAAACAACATTTTTTATTAAATCCCATCATATATATATGTT AAGAGGGGAGGGTATTGCAT
Downstream 100 bases:
>100_bases AATCATCCCAAAACTTAAAAGTTTTGGGATGATTTTATTCTTTTTATTCAATAAGAACTATTTCTTGAGAATTCAATTCA TTATCTAGCTTATCTAATTG
Product: sporulation protein YyaC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTKHKVNYKSADACFEISESIKDYLNDETIIVCIGTDKCIGDCLGPLVGSILKDSSFELPVYGTLSSPIHALNIDDRLEE IYEKHPDSPIIGVDACLGNKDAIGEIHTRDYAIHPGKGVGKELPEVGIASIIGIIDTVNNSEVFSSYSIRLSLVMDMAKL ISKALIDAYNKK
Sequences:
>Translated_172_residues MTKHKVNYKSADACFEISESIKDYLNDETIIVCIGTDKCIGDCLGPLVGSILKDSSFELPVYGTLSSPIHALNIDDRLEE IYEKHPDSPIIGVDACLGNKDAIGEIHTRDYAIHPGKGVGKELPEVGIASIIGIIDTVNNSEVFSSYSIRLSLVMDMAKL ISKALIDAYNKK >Mature_171_residues TKHKVNYKSADACFEISESIKDYLNDETIIVCIGTDKCIGDCLGPLVGSILKDSSFELPVYGTLSSPIHALNIDDRLEEI YEKHPDSPIIGVDACLGNKDAIGEIHTRDYAIHPGKGVGKELPEVGIASIIGIIDTVNNSEVFSSYSIRLSLVMDMAKLI SKALIDAYNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009665 - InterPro: IPR000671 [H]
Pfam domain/function: PF06866 DUF1256 [H]
EC number: NA
Molecular weight: Translated: 18716; Mature: 18584
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHKVNYKSADACFEISESIKDYLNDETIIVCIGTDKCIGDCLGPLVGSILKDSSFELP CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCC VYGTLSSPIHALNIDDRLEEIYEKHPDSPIIGVDACLGNKDAIGEIHTRDYAIHPGKGVG EEECCCCCEEEECHHHHHHHHHHHCCCCCEEEEHCCCCCCCCCCCCCCCCEEECCCCCCC KELPEVGIASIIGIIDTVNNSEVFSSYSIRLSLVMDMAKLISKALIDAYNKK CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKHKVNYKSADACFEISESIKDYLNDETIIVCIGTDKCIGDCLGPLVGSILKDSSFELP CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCC VYGTLSSPIHALNIDDRLEEIYEKHPDSPIIGVDACLGNKDAIGEIHTRDYAIHPGKGVG EEECCCCCEEEECHHHHHHHHHHHCCCCCEEEEHCCCCCCCCCCCCCCCCEEECCCCCCC KELPEVGIASIIGIIDTVNNSEVFSSYSIRLSLVMDMAKLISKALIDAYNKK CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377 [H]