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The map label for this gene is rbr [H]

Identifier: 187934637

GI number: 187934637

Start: 3195736

End: 3196281

Strand: Reverse

Name: rbr [H]

Synonym: CLL_A3089

Alternate gene names: 187934637

Gene position: 3196281-3195736 (Counterclockwise)

Preceding gene: 187934462

Following gene: 187934288

Centisome position: 84.11

GC content: 28.39

Gene sequence:

>546_bases
ATGAATCTAAAGGGTAGTAAAACAGAAAAAAATTTATATAAGACTTTTGCAGGAGAATGTAGGGCTAGAAGTACTTATAA
TTTATATGCAGAAAAAGCAACATTAGAAGGGTTTAGATGGATTGCTAAAGTATTTGATGAAACAGCTGAAAATGAATATG
CTCATTCAAGAGAAGCTTTTAAAAGATATTTAGGTAATGTAAAAACAACTGAAGAAAATTTAGTATCAGCTGCAATTGGA
GAGGCAAATGAAACTAAAAATATTTATAAAGAATTTGAAGATGTTGCTAGGGAAGAAGGATTTTTAGAAATAGCTGATTT
TTATAAAGAACTTAGAGAGGTTGAAGAATCACATGAAAAAAGGTATTTAGAATTAGCTGAAAAAGTTAAATTAGGTATAT
TGTTCAAATGTGAAGAAACATGTTATTGGAAATGCTTAAATTGCGGATATATTTATGAAGGAAATGAAGCTCCCAATGTA
TGTCCATTATGTAAATATCCTAGAGCATACTTTGAAAAAATCTGTGATAAAGATGTGAAAAAATAG

Upstream 100 bases:

>100_bases
CATAATGATGTTGTAACAAAAAAAAACAAAATGAATATTTTAATATAAGGTGTGACATTAGAAGATTAGTTAATGTCTAA
ATAATATTTAGGAGATAATC

Downstream 100 bases:

>100_bases
GGGGATAATAGATTATGTATTTTAAATTTCCGAATGATTTTTTAATTCCTGTTAAATCAGTAAGTGATTTAATAGATGAT
TTGGATATAGAAAATTTAAG

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNLKGSKTEKNLYKTFAGECRARSTYNLYAEKATLEGFRWIAKVFDETAENEYAHSREAFKRYLGNVKTTEENLVSAAIG
EANETKNIYKEFEDVAREEGFLEIADFYKELREVEESHEKRYLELAEKVKLGILFKCEETCYWKCLNCGYIYEGNEAPNV
CPLCKYPRAYFEKICDKDVKK

Sequences:

>Translated_181_residues
MNLKGSKTEKNLYKTFAGECRARSTYNLYAEKATLEGFRWIAKVFDETAENEYAHSREAFKRYLGNVKTTEENLVSAAIG
EANETKNIYKEFEDVAREEGFLEIADFYKELREVEESHEKRYLELAEKVKLGILFKCEETCYWKCLNCGYIYEGNEAPNV
CPLCKYPRAYFEKICDKDVKK
>Mature_181_residues
MNLKGSKTEKNLYKTFAGECRARSTYNLYAEKATLEGFRWIAKVFDETAENEYAHSREAFKRYLGNVKTTEENLVSAAIG
EANETKNIYKEFEDVAREEGFLEIADFYKELREVEESHEKRYLELAEKVKLGILFKCEETCYWKCLNCGYIYEGNEAPNV
CPLCKYPRAYFEKICDKDVKK

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 21196; Mature: 21196

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKGSKTEKNLYKTFAGECRARSTYNLYAEKATLEGFRWIAKVFDETAENEYAHSREAF
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRYLGNVKTTEENLVSAAIGEANETKNIYKEFEDVAREEGFLEIADFYKELREVEESHEK
HHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RYLELAEKVKLGILFKCEETCYWKCLNCGYIYEGNEAPNVCPLCKYPRAYFEKICDKDVK
HHHHHHHHHHHHHEEEECCHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC
K
C
>Mature Secondary Structure
MNLKGSKTEKNLYKTFAGECRARSTYNLYAEKATLEGFRWIAKVFDETAENEYAHSREAF
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRYLGNVKTTEENLVSAAIGEANETKNIYKEFEDVAREEGFLEIADFYKELREVEESHEK
HHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RYLELAEKVKLGILFKCEETCYWKCLNCGYIYEGNEAPNVCPLCKYPRAYFEKICDKDVK
HHHHHHHHHHHHHEEEECCHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1932032; 1657933; 8383040; 1958203; 2835096; 8646540; 10201393; 10968622; 12175244; 12459910 [H]