| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187934601
Identifier: 187934601
GI number: 187934601
Start: 678106
End: 678288
Strand: Reverse
Name: 187934601
Synonym: CLL_A0675
Alternate gene names: NA
Gene position: 678288-678106 (Counterclockwise)
Preceding gene: 187933971
Following gene: 187934023
Centisome position: 17.85
GC content: 29.51
Gene sequence:
>183_bases ATGGATATCAAACAACAAATATTAAATACTATGAGTGAAGCAAATAAACCACTAAGTGCTGGCGAAGTAGAAAAACTTTC AGGATTAGATCGTAAAGATATTGATAAAACCTTTAAAGAATTAAAAAAAGAAGAATTAATCATTTCACCAGTTCGTTGCA AATGGGAACCTGCTAACAAATAA
Upstream 100 bases:
>100_bases ATAAAATATTTGATTCACTTATTTTTTATGAATAAATATTATGTTATAATATAATGAATTAACAAATAATAATTATTTTA ATAATCGGAGGTAACTTAAA
Downstream 100 bases:
>100_bases AAAATATATCCCTAGGAATTTATCCTAAGGATATATTTTTTTATTTCACTCTATTTTAAATCTACAATAATTATTTAATA TTTAAAACTAATTCTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MDIKQQILNTMSEANKPLSAGEVEKLSGLDRKDIDKTFKELKKEELIISPVRCKWEPANK
Sequences:
>Translated_60_residues MDIKQQILNTMSEANKPLSAGEVEKLSGLDRKDIDKTFKELKKEELIISPVRCKWEPANK >Mature_60_residues MDIKQQILNTMSEANKPLSAGEVEKLSGLDRKDIDKTFKELKKEELIISPVRCKWEPANK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6886; Mature: 6886
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIKQQILNTMSEANKPLSAGEVEKLSGLDRKDIDKTFKELKKEELIISPVRCKWEPANK CCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDIKQQILNTMSEANKPLSAGEVEKLSGLDRKDIDKTFKELKKEELIISPVRCKWEPANK CCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA