| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934508
Identifier: 187934508
GI number: 187934508
Start: 2183186
End: 2184352
Strand: Reverse
Name: 187934508
Synonym: CLL_A2085
Alternate gene names: NA
Gene position: 2184352-2183186 (Counterclockwise)
Preceding gene: 187932365
Following gene: 187935525
Centisome position: 57.48
GC content: 26.05
Gene sequence:
>1167_bases ATGAATAAGATTTACACAGAAACAGAAGGTGTTATATTACCTAAAGAAATAAGTTTAGTGCCTTATAGTAATGAAGTTGA TTATAGAACATTTTCAGCAGTATTAGATGATAATAAAATGTCTGCTACATATAAAATGTATTGGCTTTTAGCTTTATTAG AAGAAATACAACTTGATAATTTTGACATAGATTTTAAAAAAATTATAAGTAGAATGGTAACTTTTGCTTGGTATCCAATA CTTAAGTACAAGCTTAGTTTTGGTTTGTGCGATAATTTAGTTAAAGTCGTTAATTATATTGATGATACATATAAATTAGG AAGTAACTATGATGAAAAGAAATTGTTAGATTTTATATATAATTGTGAAGATAAGATATTAAATAAGATGATTAAAGATT TAACTTATAAGGTGCCATATAGATTTTTATCACCATTTTTTAGAGAACATACCCGTGGAGAAAAATCCAAGGTTGAAAAG ATAATTGAAGAACTTTCAAGAGAAAATGAAGAGTGTGTTTATGAAATTTATATAGATGTAGATAGTAAAAAACGAATCAA AATTAGAGAAAATTGGTGTAATTACTTAAAGAATAACTATAGAATACTTCAAGGATGGGCATATTATAAGCTTGTAATTT TCCTTCAAAAAAGAAATCTTAATGTACCTGGGATAGCAATGAAACTAGAAGTTCCAAAGAAGAGAAATATTACAGCACAA ACAAAGATTTGGAAAGAGATAATAGAAACTAATCATATTAATGATATTTATACAGGATTAGAATTTACAAAAGAAAATTA TAATGAATATGGTGTTCTAAGTATGGATCATTTTATACCTTGGAGTTTTGTACTTCATGATCAAATATGGAACTTGGTAC CTACATTTAAGAACATAAACAGCAAAAAAAGTGATAACTTATTAAATTATGATAAATATATAGATAAGTTCTGCGATTTG CAATATAAAGCCTTTTCATTTGTAGTAGATAAAAAAAGAAATAACCAAATTGAAGAATATAGAGAGCTATTAAGAATAGA AGATGCTAAAAAGTTTAAAGAAGAAAAGACTATTGAAGAATTTTATAAGATGATAAAGAAAGAAGTCATGCCAGTTTATA ATATTGCTGTGAATCAGGGGTTTGGGGTTTTGGAGGAATTGGTTTGA
Upstream 100 bases:
>100_bases AAGGAGCTTGATTAATGTCAGGCTCTTATTTTTTTATAATTAAATGTGATATTTATGGTAAAATATTCATGAAAGTAAAA TGCACATAGGGAGAATTTTA
Downstream 100 bases:
>100_bases TATAGTAATTTAAAGATATTTAGAAATAAATTTTATAAAATAGGATAGGGGTGTGGAATCACTCGACTCCATCATATAAG AACTTAGAATTTGATACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNKIYTETEGVILPKEISLVPYSNEVDYRTFSAVLDDNKMSATYKMYWLLALLEEIQLDNFDIDFKKIISRMVTFAWYPI LKYKLSFGLCDNLVKVVNYIDDTYKLGSNYDEKKLLDFIYNCEDKILNKMIKDLTYKVPYRFLSPFFREHTRGEKSKVEK IIEELSRENEECVYEIYIDVDSKKRIKIRENWCNYLKNNYRILQGWAYYKLVIFLQKRNLNVPGIAMKLEVPKKRNITAQ TKIWKEIIETNHINDIYTGLEFTKENYNEYGVLSMDHFIPWSFVLHDQIWNLVPTFKNINSKKSDNLLNYDKYIDKFCDL QYKAFSFVVDKKRNNQIEEYRELLRIEDAKKFKEEKTIEEFYKMIKKEVMPVYNIAVNQGFGVLEELV
Sequences:
>Translated_388_residues MNKIYTETEGVILPKEISLVPYSNEVDYRTFSAVLDDNKMSATYKMYWLLALLEEIQLDNFDIDFKKIISRMVTFAWYPI LKYKLSFGLCDNLVKVVNYIDDTYKLGSNYDEKKLLDFIYNCEDKILNKMIKDLTYKVPYRFLSPFFREHTRGEKSKVEK IIEELSRENEECVYEIYIDVDSKKRIKIRENWCNYLKNNYRILQGWAYYKLVIFLQKRNLNVPGIAMKLEVPKKRNITAQ TKIWKEIIETNHINDIYTGLEFTKENYNEYGVLSMDHFIPWSFVLHDQIWNLVPTFKNINSKKSDNLLNYDKYIDKFCDL QYKAFSFVVDKKRNNQIEEYRELLRIEDAKKFKEEKTIEEFYKMIKKEVMPVYNIAVNQGFGVLEELV >Mature_388_residues MNKIYTETEGVILPKEISLVPYSNEVDYRTFSAVLDDNKMSATYKMYWLLALLEEIQLDNFDIDFKKIISRMVTFAWYPI LKYKLSFGLCDNLVKVVNYIDDTYKLGSNYDEKKLLDFIYNCEDKILNKMIKDLTYKVPYRFLSPFFREHTRGEKSKVEK IIEELSRENEECVYEIYIDVDSKKRIKIRENWCNYLKNNYRILQGWAYYKLVIFLQKRNLNVPGIAMKLEVPKKRNITAQ TKIWKEIIETNHINDIYTGLEFTKENYNEYGVLSMDHFIPWSFVLHDQIWNLVPTFKNINSKKSDNLLNYDKYIDKFCDL QYKAFSFVVDKKRNNQIEEYRELLRIEDAKKFKEEKTIEEFYKMIKKEVMPVYNIAVNQGFGVLEELV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46680; Mature: 46680
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIYTETEGVILPKEISLVPYSNEVDYRTFSAVLDDNKMSATYKMYWLLALLEEIQLDN CCCCEECCCCEEECCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC FDIDFKKIISRMVTFAWYPILKYKLSFGLCDNLVKVVNYIDDTYKLGSNYDEKKLLDFIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NCEDKILNKMIKDLTYKVPYRFLSPFFREHTRGEKSKVEKIIEELSRENEECVYEIYIDV CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEE DSKKRIKIRENWCNYLKNNYRILQGWAYYKLVIFLQKRNLNVPGIAMKLEVPKKRNITAQ CCCCCEEEHHHHHHHHHCCCEEEEHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCHH TKIWKEIIETNHINDIYTGLEFTKENYNEYGVLSMDHFIPWSFVLHDQIWNLVPTFKNIN HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHCCC SKKSDNLLNYDKYIDKFCDLQYKAFSFVVDKKRNNQIEEYRELLRIEDAKKFKEEKTIEE CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FYKMIKKEVMPVYNIAVNQGFGVLEELV HHHHHHHHCCHHHHHHHCCCCHHHHHCC >Mature Secondary Structure MNKIYTETEGVILPKEISLVPYSNEVDYRTFSAVLDDNKMSATYKMYWLLALLEEIQLDN CCCCEECCCCEEECCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC FDIDFKKIISRMVTFAWYPILKYKLSFGLCDNLVKVVNYIDDTYKLGSNYDEKKLLDFIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NCEDKILNKMIKDLTYKVPYRFLSPFFREHTRGEKSKVEKIIEELSRENEECVYEIYIDV CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEE DSKKRIKIRENWCNYLKNNYRILQGWAYYKLVIFLQKRNLNVPGIAMKLEVPKKRNITAQ CCCCCEEEHHHHHHHHHCCCEEEEHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCHH TKIWKEIIETNHINDIYTGLEFTKENYNEYGVLSMDHFIPWSFVLHDQIWNLVPTFKNIN HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHCCC SKKSDNLLNYDKYIDKFCDLQYKAFSFVVDKKRNNQIEEYRELLRIEDAKKFKEEKTIEE CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FYKMIKKEVMPVYNIAVNQGFGVLEELV HHHHHHHHCCHHHHHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA