| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934500
Identifier: 187934500
GI number: 187934500
Start: 2164555
End: 2165223
Strand: Reverse
Name: 187934500
Synonym: CLL_A2070
Alternate gene names: NA
Gene position: 2165223-2164555 (Counterclockwise)
Preceding gene: 187933657
Following gene: 187933261
Centisome position: 56.97
GC content: 27.95
Gene sequence:
>669_bases ATGAAGAGAATAAGATTAAAGAAAGTAATAGCAAGTGCACTAATAGTGACTTCAATATTAGCACTAAAACCAATAGGAGC AGGTGCAGAATGGAAGAATGATAATACAGGATGGTGGTATAGTGAGGGGAATTCATATTCAGTAGGATGGAAATCAATTG ATGGGATTTGGTATTATTTTTATCCTAATGGTTATATGGCTAAGGATACAACTGTTGATGGGTGTATTTTAAGCAGTAGT GGGGCTTATGATGCTGAAACTCAGAGTAAAAAAATTTCAGCTGTATATCCTTCGAATTGGTTAAAGGTAGTTGAAGATTA CAGAGAGATTTATTATATAGATAATAGAGGATCAAATGTAATTTTAGGAGCAGTGAATATGGGAGGGCTTTCAAAAGAAA ATTTTATTCAATATGAAAAATTGAATTTAATAGATCACTTAAATCTTAATAAATTAGATACAGCAAAACAAGTATTTAAT AATAAAAAAGCAGATATTGTTCATTATTTTTATAAAGATAAAAATAATAAGATTTTTACAGTATTTCAAGTTATTTTTTA TAAAGAAAATAGTGCGTATATATTTACGCTTACTGGAGTTGACAGAATTTCAGATGAAAATATGGAAGCTTTTAAAAATA TGTTAAATACAGTTGAATTTGTAGATTAA
Upstream 100 bases:
>100_bases ATTTATTATATCACAATTAATTAGTATTTATTTAACATATTTATTAAATTTATGAACTGTTATACAATTATAGTATAAGT TTTTTATAGGGGGGAAAATA
Downstream 100 bases:
>100_bases TATATATTTTACAATCTAAAGGAATTAATCCGTCAGGTTTGATGTAAGAAGTTTTTATAAATTTGTTCTTCTTACAAGTT TAAAAGAACATGTTGAGAAG
Product: cell wall binding repeat domain protein
Products: NA
Alternate protein names: 1 4-Beta-N-Acetylmuramidase
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKRIRLKKVIASALIVTSILALKPIGAGAEWKNDNTGWWYSEGNSYSVGWKSIDGIWYYFYPNGYMAKDTTVDGCILSSS GAYDAETQSKKISAVYPSNWLKVVEDYREIYYIDNRGSNVILGAVNMGGLSKENFIQYEKLNLIDHLNLNKLDTAKQVFN NKKADIVHYFYKDKNNKIFTVFQVIFYKENSAYIFTLTGVDRISDENMEAFKNMLNTVEFVD
Sequences:
>Translated_222_residues MKRIRLKKVIASALIVTSILALKPIGAGAEWKNDNTGWWYSEGNSYSVGWKSIDGIWYYFYPNGYMAKDTTVDGCILSSS GAYDAETQSKKISAVYPSNWLKVVEDYREIYYIDNRGSNVILGAVNMGGLSKENFIQYEKLNLIDHLNLNKLDTAKQVFN NKKADIVHYFYKDKNNKIFTVFQVIFYKENSAYIFTLTGVDRISDENMEAFKNMLNTVEFVD >Mature_222_residues MKRIRLKKVIASALIVTSILALKPIGAGAEWKNDNTGWWYSEGNSYSVGWKSIDGIWYYFYPNGYMAKDTTVDGCILSSS GAYDAETQSKKISAVYPSNWLKVVEDYREIYYIDNRGSNVILGAVNMGGLSKENFIQYEKLNLIDHLNLNKLDTAKQVFN NKKADIVHYFYKDKNNKIFTVFQVIFYKENSAYIFTLTGVDRISDENMEAFKNMLNTVEFVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25473; Mature: 25473
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIRLKKVIASALIVTSILALKPIGAGAEWKNDNTGWWYSEGNSYSVGWKSIDGIWYYF CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEECCEEECCEEEEE YPNGYMAKDTTVDGCILSSSGAYDAETQSKKISAVYPSNWLKVVEDYREIYYIDNRGSNV CCCCEEECCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHEEEEECCCCEE ILGAVNMGGLSKENFIQYEKLNLIDHLNLNKLDTAKQVFNNKKADIVHYFYKDKNNKIFT EEEEECCCCCCHHHCEEEHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEE VFQVIFYKENSAYIFTLTGVDRISDENMEAFKNMLNTVEFVD EEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRIRLKKVIASALIVTSILALKPIGAGAEWKNDNTGWWYSEGNSYSVGWKSIDGIWYYF CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEECCEEECCEEEEE YPNGYMAKDTTVDGCILSSSGAYDAETQSKKISAVYPSNWLKVVEDYREIYYIDNRGSNV CCCCEEECCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHEEEEECCCCEE ILGAVNMGGLSKENFIQYEKLNLIDHLNLNKLDTAKQVFNNKKADIVHYFYKDKNNKIFT EEEEECCCCCCHHHCEEEHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEE VFQVIFYKENSAYIFTLTGVDRISDENMEAFKNMLNTVEFVD EEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA