| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934391
Identifier: 187934391
GI number: 187934391
Start: 534145
End: 534588
Strand: Reverse
Name: 187934391
Synonym: CLL_A0539
Alternate gene names: NA
Gene position: 534588-534145 (Counterclockwise)
Preceding gene: 187932413
Following gene: 187935564
Centisome position: 14.07
GC content: 28.83
Gene sequence:
>444_bases ATGACTAATTTAATAAATTATATGAATGTATCACAAGCACAAATTAATGATTCCTATTTTGGAAGAATTCATTTAAAACC ATTTGGGCAAGCAGGAGGAACCATGCAGTTGCCAGGAGGCTATACATCACCAGAACGATTTGTAAGAACAGCATATCAAA AAACACATATTAAAAACCCCAAAAATAGTTCAGATGCAATAAATTCATGCTTTCACATCATGGAAAGTGTTACTATTCCT AAGGGAATAGTAATAACAAATAGAAATGCTTATGATTATACAAAATATACTGCTTTTATAAATACAAATCCTTGTGAATA TTTCTTTAAAACTTATGACAATACTCAAGTTATAAAAGCAAGTCTTTGGGATAATTGTAAAGATAGTAGTAATCCGATTT CATTAGGAAAATTAGAACGTGCAGTTAAATTTGAAGAAATATAA
Upstream 100 bases:
>100_bases GGATTATTCAATAATATAATATTAATGCCTTGTAAACTTATATACTTAGATATCTTACGTTTTTAACTTTAGTTTTAGAA AAATAGAATTTAATATATAT
Downstream 100 bases:
>100_bases AAATATTTAGAGATATATTTTTTAGTTTTAATTAGATTATCTTCTATTTCAAGTTTTCATTATGTTTTTTCATAAGTAGA AAACCCTCGACAAATTTGTC
Product: penicillin acylase
Products: NA
Alternate protein names: Penicillin V amidase; PVA [H]
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTNLINYMNVSQAQINDSYFGRIHLKPFGQAGGTMQLPGGYTSPERFVRTAYQKTHIKNPKNSSDAINSCFHIMESVTIP KGIVITNRNAYDYTKYTAFINTNPCEYFFKTYDNTQVIKASLWDNCKDSSNPISLGKLERAVKFEEI
Sequences:
>Translated_147_residues MTNLINYMNVSQAQINDSYFGRIHLKPFGQAGGTMQLPGGYTSPERFVRTAYQKTHIKNPKNSSDAINSCFHIMESVTIP KGIVITNRNAYDYTKYTAFINTNPCEYFFKTYDNTQVIKASLWDNCKDSSNPISLGKLERAVKFEEI >Mature_146_residues TNLINYMNVSQAQINDSYFGRIHLKPFGQAGGTMQLPGGYTSPERFVRTAYQKTHIKNPKNSSDAINSCFHIMESVTIPK GIVITNRNAYDYTKYTAFINTNPCEYFFKTYDNTQVIKASLWDNCKDSSNPISLGKLERAVKFEEI
Specific function: The enzyme catalyzes the conversion of penicillin to 6- aminopenicillanate The precursor, furthermore, acts as a self- processing peptidase that cleaves off the propeptide. All peptidase activity is lost on conversion to the mature peptidase [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.11 [H]
Molecular weight: Translated: 16739; Mature: 16608
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLINYMNVSQAQINDSYFGRIHLKPFGQAGGTMQLPGGYTSPERFVRTAYQKTHIKNP CCCCCCCCCCCHHCCCCCEEEEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCC KNSSDAINSCFHIMESVTIPKGIVITNRNAYDYTKYTAFINTNPCEYFFKTYDNTQVIKA CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEECCCHHHHEECCCCCEEEEE SLWDNCKDSSNPISLGKLERAVKFEEI CCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TNLINYMNVSQAQINDSYFGRIHLKPFGQAGGTMQLPGGYTSPERFVRTAYQKTHIKNP CCCCCCCCCCHHCCCCCEEEEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCC KNSSDAINSCFHIMESVTIPKGIVITNRNAYDYTKYTAFINTNPCEYFFKTYDNTQVIKA CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEECCCHHHHEECCCCCEEEEE SLWDNCKDSSNPISLGKLERAVKFEEI CCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3026906 [H]