| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934325
Identifier: 187934325
GI number: 187934325
Start: 2945822
End: 2946385
Strand: Reverse
Name: 187934325
Synonym: CLL_A2869
Alternate gene names: NA
Gene position: 2946385-2945822 (Counterclockwise)
Preceding gene: 187935365
Following gene: 187933907
Centisome position: 77.53
GC content: 24.29
Gene sequence:
>564_bases ATGGGAAAGACATTGGTTATTAATTTAGAGGATATTAATTTAAAGGGTGACATATTAGATGTTGGTCAAGAAAACTTTGG TATAATATATAGTATCTCAAAAGAAGTAGAAGATGAATTGTCACTAGATTATGTTTTTAGTAATGATAAAGAGGGGTTAG AAGGAAGTGAATATGATGCATGTACACTTTTTTTTAATTTAAATAGATTTTGGAGTAACATAGAAAAAGAAAAGTTAATT AAAGAAATTAATTCTTATATAAAAGAGAATGGGGAAATATTAATTTGGGATATTAATAAAGAAAGAGGTAAATTATTTAA TAATAAAATAAGAGTTATACTTCCAAAAGGTAAAGTGAAGGAATTTACATTTAAGAATTTGAATCCAATAATAAGTTCAA ATGTAGAAGAGGTAAAAAAGATACTTTTAAAATATTTTGATGTAGAAGAAATAAAAGTTTGGGAGGATATGTTTTTTATA AGAGCTAAAAAACTTAAAAATAAAATAAACTCTAAAGGAGTAGAGGAGATAAATACGAATGAGGATATTACTTACAGCGA TTAA
Upstream 100 bases:
>100_bases AATTTTTTAGACTTAAGATTACTAAAATATGTGTTTTCATATTTCATAATATGTTTAATAATGATAGAATATATACTTAG AGGGAAAAGAGGGGGAAGTT
Downstream 100 bases:
>100_bases CTCTAAATTTATTCATAGTAATTTAGCGGTTAGATATTTAAGAAATTTCACTAAAGATATGGATTGTGAAAATATAATAA GGGAATTTTCTATTAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MGKTLVINLEDINLKGDILDVGQENFGIIYSISKEVEDELSLDYVFSNDKEGLEGSEYDACTLFFNLNRFWSNIEKEKLI KEINSYIKENGEILIWDINKERGKLFNNKIRVILPKGKVKEFTFKNLNPIISSNVEEVKKILLKYFDVEEIKVWEDMFFI RAKKLKNKINSKGVEEINTNEDITYSD
Sequences:
>Translated_187_residues MGKTLVINLEDINLKGDILDVGQENFGIIYSISKEVEDELSLDYVFSNDKEGLEGSEYDACTLFFNLNRFWSNIEKEKLI KEINSYIKENGEILIWDINKERGKLFNNKIRVILPKGKVKEFTFKNLNPIISSNVEEVKKILLKYFDVEEIKVWEDMFFI RAKKLKNKINSKGVEEINTNEDITYSD >Mature_186_residues GKTLVINLEDINLKGDILDVGQENFGIIYSISKEVEDELSLDYVFSNDKEGLEGSEYDACTLFFNLNRFWSNIEKEKLIK EINSYIKENGEILIWDINKERGKLFNNKIRVILPKGKVKEFTFKNLNPIISSNVEEVKKILLKYFDVEEIKVWEDMFFIR AKKLKNKINSKGVEEINTNEDITYSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21875; Mature: 21744
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTLVINLEDINLKGDILDVGQENFGIIYSISKEVEDELSLDYVFSNDKEGLEGSEYDA CCCEEEEEEEECCCCCCEEECCCCCCEEEEEECCHHHHHCCEEEEECCCCCCCCCCCCCE CTLFFNLNRFWSNIEKEKLIKEINSYIKENGEILIWDINKERGKLFNNKIRVILPKGKVK EEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHCHHCCCEEEEEECCCCCC EFTFKNLNPIISSNVEEVKKILLKYFDVEEIKVWEDMFFIRAKKLKNKINSKGVEEINTN EEHHCCCCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EDITYSD CCEEECC >Mature Secondary Structure GKTLVINLEDINLKGDILDVGQENFGIIYSISKEVEDELSLDYVFSNDKEGLEGSEYDA CCEEEEEEEECCCCCCEEECCCCCCEEEEEECCHHHHHCCEEEEECCCCCCCCCCCCCE CTLFFNLNRFWSNIEKEKLIKEINSYIKENGEILIWDINKERGKLFNNKIRVILPKGKVK EEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHCHHCCCEEEEEECCCCCC EFTFKNLNPIISSNVEEVKKILLKYFDVEEIKVWEDMFFIRAKKLKNKINSKGVEEINTN EEHHCCCCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EDITYSD CCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA