| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is hslO [H]
Identifier: 187934312
GI number: 187934312
Start: 2574427
End: 2575314
Strand: Reverse
Name: hslO [H]
Synonym: CLL_A2482
Alternate gene names: 187934312
Gene position: 2575314-2574427 (Counterclockwise)
Preceding gene: 187932387
Following gene: 187935461
Centisome position: 67.77
GC content: 31.53
Gene sequence:
>888_bases ATGAAAGATAAAATAATTAGAGCAACAGCTAAAAATGGAATGGTTAGAATAATTGGAGGAATCACGACAAACTTAGTTAA TGAAGGTAGTAAGATTCACCAATGTACTCCAGTGGCAGCAGCAGCATTAGGAAGAATGCTTACTGCAGGAACTTTAATGG GAACTACATTGAAAGGTGAAAAAGAGGCTTTAACTCTAAAGATAAATGGTGGAGGAGAAGCAAAAGGAATAACAGTTACT GCACATAATGATGCAAGCGTGAAGGGTTTTATAGGGAACCCATATGTTACTAGAGAATTAAATGATAAAGGAAAGCTAGA TGTTGGTGGTGCTATAGGTAAGGACGGACTTTTATATGTAATTAAAGATTTAGGTTTAAAAGAACCATATGTAGGCCAAG TTCCAATATATAGTGGGGAAATAGCAGAAGATTTTGCTTATTATTTTACAGTATCTGAACAAACACCATCAGCAGTATCT TTAGGAGTACTAGTAGATAAAAATCTATCTATAAAAGCAGCAGGAGGATTTATAGTTCAAATGATGCCTGATGCAGATGA ACTTTTAGCAGATTTAGTAACGTATAGATTAGAAGAAATACCACCTATAACTACACTTATATCAGAAGGGAAAAGTATAG AAGAAATATTAGAGTTCATATTTGAAGGTATGGATTTAAATATATTGGATTCTATTGAACCTAAATATAAATGTGATTGC TCAAGAGAGAAAGTAGAAAAAGCATTGGCATCTATAGGTAAGAATGAGTTGCAAGAAATATATGATGATGGTAAAAATGA AGAAATAGTATGTAACTTCTGTAATACAAAATATACATTTACAACTAACGATATAGATAAGTTATTAAAAAATTCGATTA AAAAATAA
Upstream 100 bases:
>100_bases AATTAGTAGGTAAGTTCGATAGTTACAGTAATAACTCTGTATTTAAAGAGAGTGAAAGAATAGTTTATGTTGTAAGTAAA TAATGGAGGGCGATATTTAT
Downstream 100 bases:
>100_bases TATTATGATTTAATAATCAAATAATATTTCTAATTATTGAATTATTAAAACTGTTTTAAAATTAAATAAATTTAAAAAAT GTACTTTGACGTTTGAGTTA
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKDKIIRATAKNGMVRIIGGITTNLVNEGSKIHQCTPVAAAALGRMLTAGTLMGTTLKGEKEALTLKINGGGEAKGITVT AHNDASVKGFIGNPYVTRELNDKGKLDVGGAIGKDGLLYVIKDLGLKEPYVGQVPIYSGEIAEDFAYYFTVSEQTPSAVS LGVLVDKNLSIKAAGGFIVQMMPDADELLADLVTYRLEEIPPITTLISEGKSIEEILEFIFEGMDLNILDSIEPKYKCDC SREKVEKALASIGKNELQEIYDDGKNEEIVCNFCNTKYTFTTNDIDKLLKNSIKK
Sequences:
>Translated_295_residues MKDKIIRATAKNGMVRIIGGITTNLVNEGSKIHQCTPVAAAALGRMLTAGTLMGTTLKGEKEALTLKINGGGEAKGITVT AHNDASVKGFIGNPYVTRELNDKGKLDVGGAIGKDGLLYVIKDLGLKEPYVGQVPIYSGEIAEDFAYYFTVSEQTPSAVS LGVLVDKNLSIKAAGGFIVQMMPDADELLADLVTYRLEEIPPITTLISEGKSIEEILEFIFEGMDLNILDSIEPKYKCDC SREKVEKALASIGKNELQEIYDDGKNEEIVCNFCNTKYTFTTNDIDKLLKNSIKK >Mature_295_residues MKDKIIRATAKNGMVRIIGGITTNLVNEGSKIHQCTPVAAAALGRMLTAGTLMGTTLKGEKEALTLKINGGGEAKGITVT AHNDASVKGFIGNPYVTRELNDKGKLDVGGAIGKDGLLYVIKDLGLKEPYVGQVPIYSGEIAEDFAYYFTVSEQTPSAVS LGVLVDKNLSIKAAGGFIVQMMPDADELLADLVTYRLEEIPPITTLISEGKSIEEILEFIFEGMDLNILDSIEPKYKCDC SREKVEKALASIGKNELQEIYDDGKNEEIVCNFCNTKYTFTTNDIDKLLKNSIKK
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=258, Percent_Identity=25.1937984496124, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 31982; Mature: 31982
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKIIRATAKNGMVRIIGGITTNLVNEGSKIHQCTPVAAAALGRMLTAGTLMGTTLKGE CCCCEEEEECCCCEEEEECCHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCC KEALTLKINGGGEAKGITVTAHNDASVKGFIGNPYVTRELNDKGKLDVGGAIGKDGLLYV CEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCEEEEECCCCCCEEECCCCCCCCCEEE IKDLGLKEPYVGQVPIYSGEIAEDFAYYFTVSEQTPSAVSLGVLVDKNLSIKAAGGFIVQ EECCCCCCCCCCCCCCCCCCHHHCEEEEEEECCCCCCEEEEEEEEECCCEEEECCCEEEE MMPDADELLADLVTYRLEEIPPITTLISEGKSIEEILEFIFEGMDLNILDSIEPKYKCDC ECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCC SREKVEKALASIGKNELQEIYDDGKNEEIVCNFCNTKYTFTTNDIDKLLKNSIKK CHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCEEEEECHHHHHHHHHHCCC >Mature Secondary Structure MKDKIIRATAKNGMVRIIGGITTNLVNEGSKIHQCTPVAAAALGRMLTAGTLMGTTLKGE CCCCEEEEECCCCEEEEECCHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCC KEALTLKINGGGEAKGITVTAHNDASVKGFIGNPYVTRELNDKGKLDVGGAIGKDGLLYV CEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCEEEEECCCCCCEEECCCCCCCCCEEE IKDLGLKEPYVGQVPIYSGEIAEDFAYYFTVSEQTPSAVSLGVLVDKNLSIKAAGGFIVQ EECCCCCCCCCCCCCCCCCCHHHCEEEEEEECCCCCCEEEEEEEEECCCEEEECCCEEEE MMPDADELLADLVTYRLEEIPPITTLISEGKSIEEILEFIFEGMDLNILDSIEPKYKCDC ECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCC SREKVEKALASIGKNELQEIYDDGKNEEIVCNFCNTKYTFTTNDIDKLLKNSIKK CHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCEEEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA