| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934291
Identifier: 187934291
GI number: 187934291
Start: 2142001
End: 2143275
Strand: Reverse
Name: 187934291
Synonym: CLL_A2047
Alternate gene names: NA
Gene position: 2143275-2142001 (Counterclockwise)
Preceding gene: 187932901
Following gene: 187935316
Centisome position: 56.4
GC content: 26.51
Gene sequence:
>1275_bases ATGAAATTTAATAAGAAGGGGAAGGTTATTACTACTATTTTACTTGTAATTGCAGTAGTTATAGGAATATTTGCTTTTAA AATATTTCATAGAGTAACTAACTCTCCTATGATTAAAAGTGAAGATAGAAATGAGAAATTTATAGCAGATATTGAGTTCT TAAAAAAGGAATTACCTAAAAAGCATAAGAATTTATTTTTTTCTAAATCAGAAGAAGAATTTAATGATGAGATTGACTCA CTAATTAACAATGTTTCAAGATATAGTGATGAAGAGATAAATGGTGAACTTGCAAAAATAATAGTATCTATTAATGACAG TCATACTAATGTAGACATTATGGGTTCACTAGCTTATCCATTAAATTTCTTTCAGTTTGGAAATGATATATATCTTGTTG ATGGGGATTCAGAATATAAAGGGTATTGGGGAAAAAAGCTTATTTCAATAAATGGACATTCAATAAATGAATTAAAAGAA AAATTAGAACCTTTTATATCTAAGGATAATGAAGCTATAAGTAAAAATCAGTTTTCAGTATTATTAAAATGTGTAGAAGT ATTAAAACTTAGTGGAATAGTAAAGGAAGATAATGCAACCTTTACATTTGAGGGTTCACCTAATGATGATGTTATGATAA AACCAGTTACAATGGAAGAGTATATGAATATAACAACATTATCAAGTGATGAAGAGTTTAAAAATAGATTTCCTATATCA AAACAGAACTCAAATGATAATTATTGGTTTAAGTACATTGAAGAAGAAAATACTATGTATGTAAAATACAATTCATGTAT GGAAATGAAGGAGTATTCTTTTTCTAACTTCACTAAGGATGTATTTAATGTTATTGATACAAAAAATGCAACTAAATTAG TTGTAGATTTAAGAGATAATGGTGGAGGAAATTCTAGAGTTTTTGAAACATTTTTAGATGAAATAAAGAAAAGAGAAAAT ATAAATAAAGAAGGGAATCTCTATGCTATTATAGGAAGGAGAACATTCTCATCAGCAGTACTAAATGCAATGAGTCTTAG AAATGAAACTAATGCTACATTAATAGGAGAGCCAACAGGTGGAAAACCTAATCATTTTGGAGAGGTAAAAACTATACATT TATCTAATGTGAATATTGATGTTAATTATTCAAGCAATTATTTTAAAACCTCAGATGAAGATACAGATTCAATTTATCCA AATGTAGAAATAAACTTAAAAGCAGAATCATTCTTTAATGGACAAGATGACTTTTTGGAGTATGTAATAAGATAA
Upstream 100 bases:
>100_bases GGAAAAATATAGAGTATAATAGAATTTGCAAAGAAATTTATAGAAATATAGTTTATATTAGATTACTATAAATAATAACT TAGTGATGGGGGCATTAATA
Downstream 100 bases:
>100_bases TAAATACTTATAATTGCATAAATTTATTAAAGATAAGGCTTTGTTTTAAATGAAAGCTTATAATTCATTAGTTTTTGAAA ATTGAGTTATTGTATTGATA
Product: peptidase, S41 family
Products: NA
Alternate protein names: Peptidase S; S41 Family Peptidase
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MKFNKKGKVITTILLVIAVVIGIFAFKIFHRVTNSPMIKSEDRNEKFIADIEFLKKELPKKHKNLFFSKSEEEFNDEIDS LINNVSRYSDEEINGELAKIIVSINDSHTNVDIMGSLAYPLNFFQFGNDIYLVDGDSEYKGYWGKKLISINGHSINELKE KLEPFISKDNEAISKNQFSVLLKCVEVLKLSGIVKEDNATFTFEGSPNDDVMIKPVTMEEYMNITTLSSDEEFKNRFPIS KQNSNDNYWFKYIEEENTMYVKYNSCMEMKEYSFSNFTKDVFNVIDTKNATKLVVDLRDNGGGNSRVFETFLDEIKKREN INKEGNLYAIIGRRTFSSAVLNAMSLRNETNATLIGEPTGGKPNHFGEVKTIHLSNVNIDVNYSSNYFKTSDEDTDSIYP NVEINLKAESFFNGQDDFLEYVIR
Sequences:
>Translated_424_residues MKFNKKGKVITTILLVIAVVIGIFAFKIFHRVTNSPMIKSEDRNEKFIADIEFLKKELPKKHKNLFFSKSEEEFNDEIDS LINNVSRYSDEEINGELAKIIVSINDSHTNVDIMGSLAYPLNFFQFGNDIYLVDGDSEYKGYWGKKLISINGHSINELKE KLEPFISKDNEAISKNQFSVLLKCVEVLKLSGIVKEDNATFTFEGSPNDDVMIKPVTMEEYMNITTLSSDEEFKNRFPIS KQNSNDNYWFKYIEEENTMYVKYNSCMEMKEYSFSNFTKDVFNVIDTKNATKLVVDLRDNGGGNSRVFETFLDEIKKREN INKEGNLYAIIGRRTFSSAVLNAMSLRNETNATLIGEPTGGKPNHFGEVKTIHLSNVNIDVNYSSNYFKTSDEDTDSIYP NVEINLKAESFFNGQDDFLEYVIR >Mature_424_residues MKFNKKGKVITTILLVIAVVIGIFAFKIFHRVTNSPMIKSEDRNEKFIADIEFLKKELPKKHKNLFFSKSEEEFNDEIDS LINNVSRYSDEEINGELAKIIVSINDSHTNVDIMGSLAYPLNFFQFGNDIYLVDGDSEYKGYWGKKLISINGHSINELKE KLEPFISKDNEAISKNQFSVLLKCVEVLKLSGIVKEDNATFTFEGSPNDDVMIKPVTMEEYMNITTLSSDEEFKNRFPIS KQNSNDNYWFKYIEEENTMYVKYNSCMEMKEYSFSNFTKDVFNVIDTKNATKLVVDLRDNGGGNSRVFETFLDEIKKREN INKEGNLYAIIGRRTFSSAVLNAMSLRNETNATLIGEPTGGKPNHFGEVKTIHLSNVNIDVNYSSNYFKTSDEDTDSIYP NVEINLKAESFFNGQDDFLEYVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48688; Mature: 48688
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNKKGKVITTILLVIAVVIGIFAFKIFHRVTNSPMIKSEDRNEKFIADIEFLKKELPK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCH KHKNLFFSKSEEEFNDEIDSLINNVSRYSDEEINGELAKIIVSINDSHTNVDIMGSLAYP HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEEECCCCCCEEEEEEHHCC LNFFQFGNDIYLVDGDSEYKGYWGKKLISINGHSINELKEKLEPFISKDNEAISKNQFSV CHHEECCCEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHH LLKCVEVLKLSGIVKEDNATFTFEGSPNDDVMIKPVTMEEYMNITTLSSDEEFKNRFPIS HHHHHHHHHHCCEEEECCCEEEECCCCCCCEEEEEEEHHHHCCEEEECCCHHHHHCCCCC KQNSNDNYWFKYIEEENTMYVKYNSCMEMKEYSFSNFTKDVFNVIDTKNATKLVVDLRDN CCCCCCCEEEEEEECCCEEEEEECCHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECC GGGNSRVFETFLDEIKKRENINKEGNLYAIIGRRTFSSAVLNAMSLRNETNATLIGEPTG CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCC GKPNHFGEVKTIHLSNVNIDVNYSSNYFKTSDEDTDSIYPNVEINLKAESFFNGQDDFLE CCCCCCCCEEEEEEEEEEEEEEECCCCEECCCCCCCCCCCCEEEEEEHHHCCCCHHHHHH YVIR HHCC >Mature Secondary Structure MKFNKKGKVITTILLVIAVVIGIFAFKIFHRVTNSPMIKSEDRNEKFIADIEFLKKELPK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCH KHKNLFFSKSEEEFNDEIDSLINNVSRYSDEEINGELAKIIVSINDSHTNVDIMGSLAYP HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEEECCCCCCEEEEEEHHCC LNFFQFGNDIYLVDGDSEYKGYWGKKLISINGHSINELKEKLEPFISKDNEAISKNQFSV CHHEECCCEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHH LLKCVEVLKLSGIVKEDNATFTFEGSPNDDVMIKPVTMEEYMNITTLSSDEEFKNRFPIS HHHHHHHHHHCCEEEECCCEEEECCCCCCCEEEEEEEHHHHCCEEEECCCHHHHHCCCCC KQNSNDNYWFKYIEEENTMYVKYNSCMEMKEYSFSNFTKDVFNVIDTKNATKLVVDLRDN CCCCCCCEEEEEEECCCEEEEEECCHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECC GGGNSRVFETFLDEIKKRENINKEGNLYAIIGRRTFSSAVLNAMSLRNETNATLIGEPTG CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCC GKPNHFGEVKTIHLSNVNIDVNYSSNYFKTSDEDTDSIYPNVEINLKAESFFNGQDDFLE CCCCCCCCEEEEEEEEEEEEEEECCCCEECCCCCCCCCCCCEEEEEEHHHCCCCHHHHHH YVIR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA