| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934266
Identifier: 187934266
GI number: 187934266
Start: 1997761
End: 1999656
Strand: Reverse
Name: 187934266
Synonym: CLL_A1904
Alternate gene names: NA
Gene position: 1999656-1997761 (Counterclockwise)
Preceding gene: 187935076
Following gene: 187935081
Centisome position: 52.62
GC content: 32.07
Gene sequence:
>1896_bases ATGGCAGATAATATATTAGGCGGTAGGTTATCTTTAGAAGATGGATATTCTAGTGCATTACAAAGGTTTGCTAATGGAGT ATTAGCATCAGAAAATAGATTTGAACAATTTGCAAATAGCGTTATAAATAGCAATCAAAGAATAGCTAATGATACTACAA AAACTTCCCAACAAATAGATAAAATAGCGCAAAAGTTTATTAAAAAAGGTGATAGTGTAGCTGATGCTATCAACAAGGCT AATGACAGAGTAAAACAGAATCAAGAAAAGACGATAGAAGGACTAGCTCAAAAGTATATTAAGTTAGGAATGACTATACA AGATGCATATTCAAAGGCTGAACACGAATCCAATAATATATGGAATGGTGGCGGTGGTTCTAGTTCTGGTGGTCCAGGAG GTTCTGATGGATTTAAAGATTTTGCTGAATCATTTTTGACTAGTGGGTTTGGTGGAATAATAGGGAAACTAGGTCTTATA GGTGCCAGTATAACAGCTAGCATAACAGTTATGAAAACTATGAATAACTGGATGGAACAAGGCTATGATGCGCTTAATAA AGTGTCAGATGGCCTTTTTTCTTATGAAGGTGTTAAAAATGCAATTGAAGAATCTATGAACTTTGAAACTGGTAGAATGA AATTAAATTTATTTTATGGTGATGATCAAAAGGGATTAGAAGCATATCAAAAAGCCACCTATGAAGCAAACAAAACATAT GCTAGTGAAACTGATACAGTTGACATTATGGCTAAAATGGGTCAAATGAGTGTAACACTTTCAGAAGACCAATTGGAAAA ATTTCTAGATGTAGCAGGTACTAGAGATGAAGTAGAAACAAGCCACATAGGATTAGCAGTTAAAGAAGCTATTGAAGGTA GAATTGCTATGTTACAAATGTATGGTATTAACAATAGAAATTTAAAGTCTTATTATGATGGATTGAAAAAATCTAATCCA GAGGAATATAAATCCTTTAAAGGCGCATTGAATAAGAAAGGTTCAGCAGGTGATCCACAAAAATATGTTAACTTACTTAC TAGTTATATTGAGCAATCTCCAATGTCTGGCTATGCAGAAACTTATGCTAAAACAGTTAAAGGTAAATTAGAAAGACTAG AAGGTGTTTGGGGAAAACTAAAAGCTGAAATAATGGGAATTGACACTAATACTGGTATTGCAAAAGAGGGCGGAGTATTT GCAGCTGTTGCTAAAATGGTTGATAGCTTAAAAACTAAATTAGAAGATGAAAATACTATTAAAGGTTTAGAAATAATAGG AGAAGGCTTTGGAGATGCATTTACTGCGATTGGAGATGCTTTTACTTATACATTAGATAATATAGATCCAGAAGAATTTG CAAATACCATAAAAAGTGTTGGAGAGACTGTTTCAGATTTTATTAAAAGTTTAGTAGATAGTGGAGCACTAGATAAACTT TTAGATACTTTGCCTAAGCTCACAGAAAAAGTATTAAAAACAAAAGAATATAATATGATAACAGATAATTTTATGGCATC AAGGGAAGTTTCAATTGCAGAAAATAGACCTGGAGGTGGACTTTGGGCAGATGCATGGCGTAAGAAAATATGGACATGGA TGGATTTTGATGTAAAGGAAGGTAGTAATGCTTATCCTGAAAAACCTAGTGGACATGGATTCTTATATGATTTATTTAAA GGAAGCTCTACAAGTGATTTATTAACAGATACTAATGCAAGTACTGCAATAGAAAAAAATAATAAGCTTAATGATGAACA AAAAAATACTTTAAAGCAAGAAATAAAGAATGATAGTCAAACAACTTATAATACTATAACAATTCAAAAAGTAGAAGCTA ATAATTTTGATGAGATAATGAACTCTATAAAAGCAGCTCAAAAAAATAGGAAGTAG
Upstream 100 bases:
>100_bases ATAATGAAAAAACAAAAAACTGATAATAATATAGCATTAGCTGAATATACAGGAAAATTAGCTAATCCATATGCAATAAA GAAATAAAGGCGGGAGGTCT
Downstream 100 bases:
>100_bases GTGATACAATGGCTCAATACACATTAAATGATTCACAAATAGTAATTACTACATTAAAACATTATGAAAATATGAATGGT TTGAGAGTTGATAGTGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MADNILGGRLSLEDGYSSALQRFANGVLASENRFEQFANSVINSNQRIANDTTKTSQQIDKIAQKFIKKGDSVADAINKA NDRVKQNQEKTIEGLAQKYIKLGMTIQDAYSKAEHESNNIWNGGGGSSSGGPGGSDGFKDFAESFLTSGFGGIIGKLGLI GASITASITVMKTMNNWMEQGYDALNKVSDGLFSYEGVKNAIEESMNFETGRMKLNLFYGDDQKGLEAYQKATYEANKTY ASETDTVDIMAKMGQMSVTLSEDQLEKFLDVAGTRDEVETSHIGLAVKEAIEGRIAMLQMYGINNRNLKSYYDGLKKSNP EEYKSFKGALNKKGSAGDPQKYVNLLTSYIEQSPMSGYAETYAKTVKGKLERLEGVWGKLKAEIMGIDTNTGIAKEGGVF AAVAKMVDSLKTKLEDENTIKGLEIIGEGFGDAFTAIGDAFTYTLDNIDPEEFANTIKSVGETVSDFIKSLVDSGALDKL LDTLPKLTEKVLKTKEYNMITDNFMASREVSIAENRPGGGLWADAWRKKIWTWMDFDVKEGSNAYPEKPSGHGFLYDLFK GSSTSDLLTDTNASTAIEKNNKLNDEQKNTLKQEIKNDSQTTYNTITIQKVEANNFDEIMNSIKAAQKNRK
Sequences:
>Translated_631_residues MADNILGGRLSLEDGYSSALQRFANGVLASENRFEQFANSVINSNQRIANDTTKTSQQIDKIAQKFIKKGDSVADAINKA NDRVKQNQEKTIEGLAQKYIKLGMTIQDAYSKAEHESNNIWNGGGGSSSGGPGGSDGFKDFAESFLTSGFGGIIGKLGLI GASITASITVMKTMNNWMEQGYDALNKVSDGLFSYEGVKNAIEESMNFETGRMKLNLFYGDDQKGLEAYQKATYEANKTY ASETDTVDIMAKMGQMSVTLSEDQLEKFLDVAGTRDEVETSHIGLAVKEAIEGRIAMLQMYGINNRNLKSYYDGLKKSNP EEYKSFKGALNKKGSAGDPQKYVNLLTSYIEQSPMSGYAETYAKTVKGKLERLEGVWGKLKAEIMGIDTNTGIAKEGGVF AAVAKMVDSLKTKLEDENTIKGLEIIGEGFGDAFTAIGDAFTYTLDNIDPEEFANTIKSVGETVSDFIKSLVDSGALDKL LDTLPKLTEKVLKTKEYNMITDNFMASREVSIAENRPGGGLWADAWRKKIWTWMDFDVKEGSNAYPEKPSGHGFLYDLFK GSSTSDLLTDTNASTAIEKNNKLNDEQKNTLKQEIKNDSQTTYNTITIQKVEANNFDEIMNSIKAAQKNRK >Mature_630_residues ADNILGGRLSLEDGYSSALQRFANGVLASENRFEQFANSVINSNQRIANDTTKTSQQIDKIAQKFIKKGDSVADAINKAN DRVKQNQEKTIEGLAQKYIKLGMTIQDAYSKAEHESNNIWNGGGGSSSGGPGGSDGFKDFAESFLTSGFGGIIGKLGLIG ASITASITVMKTMNNWMEQGYDALNKVSDGLFSYEGVKNAIEESMNFETGRMKLNLFYGDDQKGLEAYQKATYEANKTYA SETDTVDIMAKMGQMSVTLSEDQLEKFLDVAGTRDEVETSHIGLAVKEAIEGRIAMLQMYGINNRNLKSYYDGLKKSNPE EYKSFKGALNKKGSAGDPQKYVNLLTSYIEQSPMSGYAETYAKTVKGKLERLEGVWGKLKAEIMGIDTNTGIAKEGGVFA AVAKMVDSLKTKLEDENTIKGLEIIGEGFGDAFTAIGDAFTYTLDNIDPEEFANTIKSVGETVSDFIKSLVDSGALDKLL DTLPKLTEKVLKTKEYNMITDNFMASREVSIAENRPGGGLWADAWRKKIWTWMDFDVKEGSNAYPEKPSGHGFLYDLFKG SSTSDLLTDTNASTAIEKNNKLNDEQKNTLKQEIKNDSQTTYNTITIQKVEANNFDEIMNSIKAAQKNRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69336; Mature: 69205
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNILGGRLSLEDGYSSALQRFANGVLASENRFEQFANSVINSNQRIANDTTKTSQQID CCCCCCCCEEECCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHH KIAQKFIKKGDSVADAINKANDRVKQNQEKTIEGLAQKYIKLGMTIQDAYSKAEHESNNI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC WNGGGGSSSGGPGGSDGFKDFAESFLTSGFGGIIGKLGLIGASITASITVMKTMNNWMEQ CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYDALNKVSDGLFSYEGVKNAIEESMNFETGRMKLNLFYGDDQKGLEAYQKATYEANKTY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCC ASETDTVDIMAKMGQMSVTLSEDQLEKFLDVAGTRDEVETSHIGLAVKEAIEGRIAMLQM CCCCCHHHHHHHHCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHE YGINNRNLKSYYDGLKKSNPEEYKSFKGALNKKGSAGDPQKYVNLLTSYIEQSPMSGYAE ECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH TYAKTVKGKLERLEGVWGKLKAEIMGIDTNTGIAKEGGVFAAVAKMVDSLKTKLEDENTI HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH KGLEIIGEGFGDAFTAIGDAFTYTLDNIDPEEFANTIKSVGETVSDFIKSLVDSGALDKL HHHHHHHCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LDTLPKLTEKVLKTKEYNMITDNFMASREVSIAENRPGGGLWADAWRKKIWTWMDFDVKE HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC GSNAYPEKPSGHGFLYDLFKGSSTSDLLTDTNASTAIEKNNKLNDEQKNTLKQEIKNDSQ CCCCCCCCCCCCCEEEEHHCCCCCCHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCC TTYNTITIQKVEANNFDEIMNSIKAAQKNRK CEEEEEEEEEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ADNILGGRLSLEDGYSSALQRFANGVLASENRFEQFANSVINSNQRIANDTTKTSQQID CCCCCCCEEECCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHH KIAQKFIKKGDSVADAINKANDRVKQNQEKTIEGLAQKYIKLGMTIQDAYSKAEHESNNI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC WNGGGGSSSGGPGGSDGFKDFAESFLTSGFGGIIGKLGLIGASITASITVMKTMNNWMEQ CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYDALNKVSDGLFSYEGVKNAIEESMNFETGRMKLNLFYGDDQKGLEAYQKATYEANKTY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCC ASETDTVDIMAKMGQMSVTLSEDQLEKFLDVAGTRDEVETSHIGLAVKEAIEGRIAMLQM CCCCCHHHHHHHHCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHE YGINNRNLKSYYDGLKKSNPEEYKSFKGALNKKGSAGDPQKYVNLLTSYIEQSPMSGYAE ECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH TYAKTVKGKLERLEGVWGKLKAEIMGIDTNTGIAKEGGVFAAVAKMVDSLKTKLEDENTI HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH KGLEIIGEGFGDAFTAIGDAFTYTLDNIDPEEFANTIKSVGETVSDFIKSLVDSGALDKL HHHHHHHCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LDTLPKLTEKVLKTKEYNMITDNFMASREVSIAENRPGGGLWADAWRKKIWTWMDFDVKE HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC GSNAYPEKPSGHGFLYDLFKGSSTSDLLTDTNASTAIEKNNKLNDEQKNTLKQEIKNDSQ CCCCCCCCCCCCCEEEEHHCCCCCCHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCC TTYNTITIQKVEANNFDEIMNSIKAAQKNRK CEEEEEEEEEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA