| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934210
Identifier: 187934210
GI number: 187934210
Start: 2900218
End: 2901132
Strand: Reverse
Name: 187934210
Synonym: CLL_A2826
Alternate gene names: NA
Gene position: 2901132-2900218 (Counterclockwise)
Preceding gene: 187935020
Following gene: 187933108
Centisome position: 76.34
GC content: 29.29
Gene sequence:
>915_bases ATGAATTTATTAAAAAGTTCTTTATTTGTATTCTTAGGAGCTTGTTGTTATGGAGTGCTATCAACGCTAGTAAAATTAGC ATATAATGATGGGTTTGTATTTAAAGATGTTGTTATGAGTCAATTTTTATTTGGATGGTTAATTATGTTAATCATAATGT TAATCTCATCTAGAAAAACTATTACGATAAAACAGTTCGTTTCACTAGCATTAATCGGAATAAGTACATGTGCAACAACT GTTTTTTATTACTTATCTCTTGAAAGTATTCCAGCATCATTTGCTGTTGTACTATTATTTCAATTTACATGGATTGGAGT ATTGATTGAATCCATAGTAGATAAGAAATTTCCATCAAAAATAAAAATATTATCTATTATAATATTATTTATTGGAACTA TATTAGCTAGTGGAGTAATTAATAGTAATAACTTTAAGTGGAGCTTTAGTGGAATATTATTTGGACTTATGGCAGCGCTT TCATATTCGCTATTTGTATTTTTTAGTGGAAGAGTGGAAACTCAAATACCGTCAGTTAATAGAAGCTTTTGTGTAACAAC AGGAGCATTATTAGTTGCCTTTGCTATTTGTCCAAACTATTTCTCTAATGGATGCTTATCACAAGGAATATGGAAATATG GAATTATATTAGGCATATTTGGTGCTGTATTACCAGTACTATTCTTTGCTATAGGAACACCTAAATTAAGTACAGGCCTA TCAACTATTCTTGGAGCAGGAGAATTACCAGTAGCTATTATAGCGTCTATTGTTATTCTAAAAGAAGAGGTTTCTATGAC AAAGTGGGTAGGAGTTATAATAATTTTAATGGGGGTTGCATTACCACAGTTAATAAATCTAAAAAACAACAATTCAATAA AATTTTACAAAGAACCTGATACCAACTTATCATAA
Upstream 100 bases:
>100_bases GAAAGGAGATGAATAATAAATATTTACATAATTAGTTATACGTTAATGATAAAAATTTAAAGTAATTATTTTATATTACT GAAATTAAAAGGAGTTTATT
Downstream 100 bases:
>100_bases AATATAATACCAATTTAAAATTAGGCTCTGTTAAAACATAATTTTAAATTAAATAAAAATAGTAGTTTCTAATAGCTAGA AACTACTATTTTTTATAAAT
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MNLLKSSLFVFLGACCYGVLSTLVKLAYNDGFVFKDVVMSQFLFGWLIMLIIMLISSRKTITIKQFVSLALIGISTCATT VFYYLSLESIPASFAVVLLFQFTWIGVLIESIVDKKFPSKIKILSIIILFIGTILASGVINSNNFKWSFSGILFGLMAAL SYSLFVFFSGRVETQIPSVNRSFCVTTGALLVAFAICPNYFSNGCLSQGIWKYGIILGIFGAVLPVLFFAIGTPKLSTGL STILGAGELPVAIIASIVILKEEVSMTKWVGVIIILMGVALPQLINLKNNNSIKFYKEPDTNLS
Sequences:
>Translated_304_residues MNLLKSSLFVFLGACCYGVLSTLVKLAYNDGFVFKDVVMSQFLFGWLIMLIIMLISSRKTITIKQFVSLALIGISTCATT VFYYLSLESIPASFAVVLLFQFTWIGVLIESIVDKKFPSKIKILSIIILFIGTILASGVINSNNFKWSFSGILFGLMAAL SYSLFVFFSGRVETQIPSVNRSFCVTTGALLVAFAICPNYFSNGCLSQGIWKYGIILGIFGAVLPVLFFAIGTPKLSTGL STILGAGELPVAIIASIVILKEEVSMTKWVGVIIILMGVALPQLINLKNNNSIKFYKEPDTNLS >Mature_304_residues MNLLKSSLFVFLGACCYGVLSTLVKLAYNDGFVFKDVVMSQFLFGWLIMLIIMLISSRKTITIKQFVSLALIGISTCATT VFYYLSLESIPASFAVVLLFQFTWIGVLIESIVDKKFPSKIKILSIIILFIGTILASGVINSNNFKWSFSGILFGLMAAL SYSLFVFFSGRVETQIPSVNRSFCVTTGALLVAFAICPNYFSNGCLSQGIWKYGIILGIFGAVLPVLFFAIGTPKLSTGL STILGAGELPVAIIASIVILKEEVSMTKWVGVIIILMGVALPQLINLKNNNSIKFYKEPDTNLS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33182; Mature: 33182
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLKSSLFVFLGACCYGVLSTLVKLAYNDGFVFKDVVMSQFLFGWLIMLIIMLISSRKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC ITIKQFVSLALIGISTCATTVFYYLSLESIPASFAVVLLFQFTWIGVLIESIVDKKFPSK EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH IKILSIIILFIGTILASGVINSNNFKWSFSGILFGLMAALSYSLFVFFSGRVETQIPSVN HHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC RSFCVTTGALLVAFAICPNYFSNGCLSQGIWKYGIILGIFGAVLPVLFFAIGTPKLSTGL CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH STILGAGELPVAIIASIVILKEEVSMTKWVGVIIILMGVALPQLINLKNNNSIKFYKEPD HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC TNLS CCCC >Mature Secondary Structure MNLLKSSLFVFLGACCYGVLSTLVKLAYNDGFVFKDVVMSQFLFGWLIMLIIMLISSRKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC ITIKQFVSLALIGISTCATTVFYYLSLESIPASFAVVLLFQFTWIGVLIESIVDKKFPSK EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH IKILSIIILFIGTILASGVINSNNFKWSFSGILFGLMAALSYSLFVFFSGRVETQIPSVN HHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC RSFCVTTGALLVAFAICPNYFSNGCLSQGIWKYGIILGIFGAVLPVLFFAIGTPKLSTGL CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH STILGAGELPVAIIASIVILKEEVSMTKWVGVIIILMGVALPQLINLKNNNSIKFYKEPD HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC TNLS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA