Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187934070

Identifier: 187934070

GI number: 187934070

Start: 2469432

End: 2469845

Strand: Reverse

Name: 187934070

Synonym: CLL_A2378

Alternate gene names: NA

Gene position: 2469845-2469432 (Counterclockwise)

Preceding gene: 187935103

Following gene: 187935139

Centisome position: 64.99

GC content: 33.82

Gene sequence:

>414_bases
ATGAGTTTTAAATACGGTCAAATTAAACAAGTAACAATTACTTCTGAATCAAGTAAACTTTCAAAGCAAAAACATCGTTC
AAGTTTGAATTATGATCTTTCAGGAATTGCAGGGACTAATATTCTCTGGATTTGTCCAGCAGGAGTAGTTTTTGATGTTA
AACAAGATAGAACTGCTGCTAAAGATCCAGTTTTATTCTCAAGTGTAGCTAATGGACGAGTAACTACAGGACTAAGCAAA
GAAGCAGCAGCTAATTTATATATTGCTGATCCTCAAAACGCCACTTTAAAATTTGATATAACTTTAATAGCAACTACAGA
TTTACCAACTTGTAACTGCACTTGTAATGATGGGTATTCTGAATATGTTTCTATTGGTTCTGAGTATGTTTACCCTGGTG
ACGAAGACGACTAA

Upstream 100 bases:

>100_bases
GGAAGTGAGAATAGATACATATTTTTTTATTATGTGACCATTTTAACTTTTTAACATATAATAGAATTAGAACAAAATTT
ATATTAAAAAGGTGATAATG

Downstream 100 bases:

>100_bases
AAAAGAAGCTGTATAAAATAATAAATATGGAGGGGCTGTTGTATAACGGCTCCTTTTGTAAGAATAAATTTAAATATACA
ATATAAAAATTAATTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSFKYGQIKQVTITSESSKLSKQKHRSSLNYDLSGIAGTNILWICPAGVVFDVKQDRTAAKDPVLFSSVANGRVTTGLSK
EAAANLYIADPQNATLKFDITLIATTDLPTCNCTCNDGYSEYVSIGSEYVYPGDEDD

Sequences:

>Translated_137_residues
MSFKYGQIKQVTITSESSKLSKQKHRSSLNYDLSGIAGTNILWICPAGVVFDVKQDRTAAKDPVLFSSVANGRVTTGLSK
EAAANLYIADPQNATLKFDITLIATTDLPTCNCTCNDGYSEYVSIGSEYVYPGDEDD
>Mature_136_residues
SFKYGQIKQVTITSESSKLSKQKHRSSLNYDLSGIAGTNILWICPAGVVFDVKQDRTAAKDPVLFSSVANGRVTTGLSKE
AAANLYIADPQNATLKFDITLIATTDLPTCNCTCNDGYSEYVSIGSEYVYPGDEDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14845; Mature: 14713

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKYGQIKQVTITSESSKLSKQKHRSSLNYDLSGIAGTNILWICPAGVVFDVKQDRTAA
CCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCC
KDPVLFSSVANGRVTTGLSKEAAANLYIADPQNATLKFDITLIATTDLPTCNCTCNDGYS
CCCEEEEECCCCEEECCCCCHHCCEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCHH
EYVSIGSEYVYPGDEDD
HHHHCCCEEECCCCCCC
>Mature Secondary Structure 
SFKYGQIKQVTITSESSKLSKQKHRSSLNYDLSGIAGTNILWICPAGVVFDVKQDRTAA
CCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCC
KDPVLFSSVANGRVTTGLSKEAAANLYIADPQNATLKFDITLIATTDLPTCNCTCNDGYS
CCCEEEEECCCCEEECCCCCHHCCEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCHH
EYVSIGSEYVYPGDEDD
HHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA