| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934037
Identifier: 187934037
GI number: 187934037
Start: 329823
End: 330314
Strand: Reverse
Name: 187934037
Synonym: CLL_A0333
Alternate gene names: NA
Gene position: 330314-329823 (Counterclockwise)
Preceding gene: 187932534
Following gene: 187933612
Centisome position: 8.69
GC content: 25.2
Gene sequence:
>492_bases ATGCATAAACAAGATTTAGATAAAATTTCCGATTCTTTATTAACTTTTTTATTTTTAGTTAAAAATAATGTATTTAGTGA AAATGAATTTATAAAGAATTTTCCTAAACCACCAAAAGAAGTTGAGGATTATATGAATGAATTTCCTATGCCACCATCTC ATACAAAAGTAATTCTGTATCTTCATAAATCAAGTTCTTCACCAATATCTCAAATAGCTAGTAATTTAGGTATATCTAAA TCTAATATGACACCCATAATAGATAAGCTTATAGAATACGGTCTAGTTAATAGATATCCAGATTCTAAAGATAGACGAAT ACTTAGAGTTGAATTAACTGCAAAGGCATTAGATATATTTGAAAAATTCAGAAATGCTGCAAAAGCTAAATTAGCAAGTA AAATTGAAATTTTAGATGATGATGATTTATATGCATTAAGTGATTGTGTATCAAAGCTATACGATATAATGCAAAAAATA GAAAAAAAATAA
Upstream 100 bases:
>100_bases TCATAATTATTCTAAGTCAATAACTTTCCTATCTTGTATATGAATAAGTATTAGTTTATAATTTAGTTTATACTTATCAG CATATTAAGGAGTTAGATTA
Downstream 100 bases:
>100_bases GACGGATAAAATCATCCGTCTTATTTTTGATTTATTTTAATTTATAAGTTTAGGCTAATTTCAACACCGTAGTGATCAGA TATTACATCTTTATTTGTTC
Product: MarR-family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Transcriptional Regulator
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MHKQDLDKISDSLLTFLFLVKNNVFSENEFIKNFPKPPKEVEDYMNEFPMPPSHTKVILYLHKSSSSPISQIASNLGISK SNMTPIIDKLIEYGLVNRYPDSKDRRILRVELTAKALDIFEKFRNAAKAKLASKIEILDDDDLYALSDCVSKLYDIMQKI EKK
Sequences:
>Translated_163_residues MHKQDLDKISDSLLTFLFLVKNNVFSENEFIKNFPKPPKEVEDYMNEFPMPPSHTKVILYLHKSSSSPISQIASNLGISK SNMTPIIDKLIEYGLVNRYPDSKDRRILRVELTAKALDIFEKFRNAAKAKLASKIEILDDDDLYALSDCVSKLYDIMQKI EKK >Mature_163_residues MHKQDLDKISDSLLTFLFLVKNNVFSENEFIKNFPKPPKEVEDYMNEFPMPPSHTKVILYLHKSSSSPISQIASNLGISK SNMTPIIDKLIEYGLVNRYPDSKDRRILRVELTAKALDIFEKFRNAAKAKLASKIEILDDDDLYALSDCVSKLYDIMQKI EKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18786; Mature: 18786
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKQDLDKISDSLLTFLFLVKNNVFSENEFIKNFPKPPKEVEDYMNEFPMPPSHTKVILY CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEE LHKSSSSPISQIASNLGISKSNMTPIIDKLIEYGLVNRYPDSKDRRILRVELTAKALDIF EECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHH EKFRNAAKAKLASKIEILDDDDLYALSDCVSKLYDIMQKIEKK HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHKQDLDKISDSLLTFLFLVKNNVFSENEFIKNFPKPPKEVEDYMNEFPMPPSHTKVILY CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEE LHKSSSSPISQIASNLGISKSNMTPIIDKLIEYGLVNRYPDSKDRRILRVELTAKALDIF EECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHH EKFRNAAKAKLASKIEILDDDDLYALSDCVSKLYDIMQKIEKK HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA