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The map label for this gene is 187933973

Identifier: 187933973

GI number: 187933973

Start: 2974597

End: 2975448

Strand: Reverse

Name: 187933973

Synonym: CLL_A2895

Alternate gene names: NA

Gene position: 2975448-2974597 (Counterclockwise)

Preceding gene: 187933034

Following gene: 187934560

Centisome position: 78.29

GC content: 29.23

Gene sequence:

>852_bases
ATGGCAGTAAAGGTAGTAACAGACAGTACTAGTTATATTCCACAAGGGTTAGTTGAAGAATATGATATTTCAATTGTTTC
ATTGAATGTTATTTTAAATGGAAAAAGTTATAAAGAAGTTGATTTAAATAATAAAGGGTTTTATGAAGATATGGAAAAAA
GTAATGAAATTCCAACTTCATCGCAACCAAGTATAGATGAACTTTTTGAAGTATTTAAAGAAAAAGTAGCTAATGGACAT
GATGTTGTAGGAATATTTTTATCATCAAAGATGAGTGGAACGTATTCAAGTTCTCATTTAGTTCGTGAAATGATTTTAGA
AGAATATCCAGATGCAAAGATAGAGCTAATAGATTCAACAACTAATTGTATGCAAATGGGATACCAAGTGTTAGAGGCGG
CCAAAAATGCCAAACTTGGAAATAGCATAAATCAAGTTGTTAAAGCAGCAATACAAGTAAAAGAAAATAGTAGATTTTTA
TTTGTGCCAGATACACTAAAATATTTAAAAAAAGGTGGAAGAATAGGTGGAGCTTCTGCTTTGTTTGGAGCAATACTTCA
AATAAAACCTATTTTAACAGTACAAAATGGAGAAACTACAGTATTTAATAAAGTAAGAACAAAGAAAAAAGCAGTTGACA
CAATAGTAAATGAAGTTATAAAAAATGTTAAAGAAAAAGGTTTAGGAGAAGTTATAGTGCATCATATTAATTGTGAAGAT
GAAGGATTAGAACTTGCTAAAAGATTAGAAGAAAAATTAGATATACCTGTTACTATTCAATATATAGGACCAATAATAGG
GCTACATGTTGGTCCAGGCAGTATAGGAATTGCATATTATACTAAAGGTTAA

Upstream 100 bases:

>100_bases
TATGTATAAGATAAAAACTGGTAATCAAGAATATAAGGAAATAACTAATAAATATGATATAATTATAGGTATAGAGATTA
CATATATTAGGAGGACAACT

Downstream 100 bases:

>100_bases
TTTAATCTCAATAAAATATGTGTGATAAAAGCATCTTGGGGCATATCCTCTAGATGCTTATTTTGGTATACTAAAATAAA
TATGAATTTATTAGGGGGCA

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MAVKVVTDSTSYIPQGLVEEYDISIVSLNVILNGKSYKEVDLNNKGFYEDMEKSNEIPTSSQPSIDELFEVFKEKVANGH
DVVGIFLSSKMSGTYSSSHLVREMILEEYPDAKIELIDSTTNCMQMGYQVLEAAKNAKLGNSINQVVKAAIQVKENSRFL
FVPDTLKYLKKGGRIGGASALFGAILQIKPILTVQNGETTVFNKVRTKKKAVDTIVNEVIKNVKEKGLGEVIVHHINCED
EGLELAKRLEEKLDIPVTIQYIGPIIGLHVGPGSIGIAYYTKG

Sequences:

>Translated_283_residues
MAVKVVTDSTSYIPQGLVEEYDISIVSLNVILNGKSYKEVDLNNKGFYEDMEKSNEIPTSSQPSIDELFEVFKEKVANGH
DVVGIFLSSKMSGTYSSSHLVREMILEEYPDAKIELIDSTTNCMQMGYQVLEAAKNAKLGNSINQVVKAAIQVKENSRFL
FVPDTLKYLKKGGRIGGASALFGAILQIKPILTVQNGETTVFNKVRTKKKAVDTIVNEVIKNVKEKGLGEVIVHHINCED
EGLELAKRLEEKLDIPVTIQYIGPIIGLHVGPGSIGIAYYTKG
>Mature_282_residues
AVKVVTDSTSYIPQGLVEEYDISIVSLNVILNGKSYKEVDLNNKGFYEDMEKSNEIPTSSQPSIDELFEVFKEKVANGHD
VVGIFLSSKMSGTYSSSHLVREMILEEYPDAKIELIDSTTNCMQMGYQVLEAAKNAKLGNSINQVVKAAIQVKENSRFLF
VPDTLKYLKKGGRIGGASALFGAILQIKPILTVQNGETTVFNKVRTKKKAVDTIVNEVIKNVKEKGLGEVIVHHINCEDE
GLELAKRLEEKLDIPVTIQYIGPIIGLHVGPGSIGIAYYTKG

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31142; Mature: 31011

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKVVTDSTSYIPQGLVEEYDISIVSLNVILNGKSYKEVDLNNKGFYEDMEKSNEIPTS
CEEEEEECCCCCCCHHHHHHHCEEEEEEEEEECCCCCEEECCCCCCCHHHHHHCCCCCCC
SQPSIDELFEVFKEKVANGHDVVGIFLSSKMSGTYSSSHLVREMILEEYPDAKIELIDST
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCH
TNCMQMGYQVLEAAKNAKLGNSINQVVKAAIQVKENSRFLFVPDTLKYLKKGGRIGGASA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCEEEECCHHHHHHHCCCCCCCHHH
LFGAILQIKPILTVQNGETTVFNKVRTKKKAVDTIVNEVIKNVKEKGLGEVIVHHINCED
HHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
EGLELAKRLEEKLDIPVTIQYIGPIIGLHVGPGSIGIAYYTKG
HHHHHHHHHHHHCCCCEEEEEHHHHHEEEECCCCEEEEEEECC
>Mature Secondary Structure 
AVKVVTDSTSYIPQGLVEEYDISIVSLNVILNGKSYKEVDLNNKGFYEDMEKSNEIPTS
EEEEEECCCCCCCHHHHHHHCEEEEEEEEEECCCCCEEECCCCCCCHHHHHHCCCCCCC
SQPSIDELFEVFKEKVANGHDVVGIFLSSKMSGTYSSSHLVREMILEEYPDAKIELIDST
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCH
TNCMQMGYQVLEAAKNAKLGNSINQVVKAAIQVKENSRFLFVPDTLKYLKKGGRIGGASA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCEEEECCHHHHHHHCCCCCCCHHH
LFGAILQIKPILTVQNGETTVFNKVRTKKKAVDTIVNEVIKNVKEKGLGEVIVHHINCED
HHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
EGLELAKRLEEKLDIPVTIQYIGPIIGLHVGPGSIGIAYYTKG
HHHHHHHHHHHHCCCCEEEEEHHHHHEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]