| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933959
Identifier: 187933959
GI number: 187933959
Start: 2859661
End: 2860212
Strand: Reverse
Name: 187933959
Synonym: CLL_A2766
Alternate gene names: NA
Gene position: 2860212-2859661 (Counterclockwise)
Preceding gene: 187932379
Following gene: 187932994
Centisome position: 75.26
GC content: 28.44
Gene sequence:
>552_bases ATGAGTAATAATACTGGATATGATAAATGTGAATTATGTGGAGAAATGATTAACATTTATAATGCAAGATTGGGTTTTAA AGATAATAATGAAAAATTGCATAATTTTTGTATGCAACACGAAAGAACAAAGGAATTAGATTTAAAAATAAAAGAGCTTA ATAAAGGTTCTGATGATATTAAATTCATTCATAAAGGAATAAGCGTTTATAGAATGAATGACTATGAGTGGTGGGCAAGT AAATGGTATATAGAAGATACTAATGAATGGTATATTAAAGAACATGGATTAGACGAAGAAGATAATCCAACTGATGAAAT TTACTCATGTGACTTAGATAAAGAAGGCGTATGGATTGAAACAAATGAGCCAAATGATATAAAAGAACTTGGTGATAACG ATGAATTGGGGAATGTTGTTTTAGGAAATCCTGAATTTGGAGATTTAAAAAGATATGGTGATGGAATTTTTAAATATACA AGTTTTAGAGAAGCATTACTTTTAGATTTAGACTTTAAAGAGCCTTATTGTATAGCAAGTACAGAGTGGTAG
Upstream 100 bases:
>100_bases ATGTACTATTAGGACTTTCAGAAGGTGAATATCCTACATGCTATTTTGAACGTATTTAATACACAATTTGTAGAAAGTCG GAACAATAGGAGGGGAAATT
Downstream 100 bases:
>100_bases ATATTACGCAATACTAAGTTAGTATTAGGAGGAATTAATAATGAGAGAAAAAAGAAATGGTTTAAGACCTATATTAGTAA TTAAGGATAATACAGTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSNNTGYDKCELCGEMINIYNARLGFKDNNEKLHNFCMQHERTKELDLKIKELNKGSDDIKFIHKGISVYRMNDYEWWAS KWYIEDTNEWYIKEHGLDEEDNPTDEIYSCDLDKEGVWIETNEPNDIKELGDNDELGNVVLGNPEFGDLKRYGDGIFKYT SFREALLLDLDFKEPYCIASTEW
Sequences:
>Translated_183_residues MSNNTGYDKCELCGEMINIYNARLGFKDNNEKLHNFCMQHERTKELDLKIKELNKGSDDIKFIHKGISVYRMNDYEWWAS KWYIEDTNEWYIKEHGLDEEDNPTDEIYSCDLDKEGVWIETNEPNDIKELGDNDELGNVVLGNPEFGDLKRYGDGIFKYT SFREALLLDLDFKEPYCIASTEW >Mature_182_residues SNNTGYDKCELCGEMINIYNARLGFKDNNEKLHNFCMQHERTKELDLKIKELNKGSDDIKFIHKGISVYRMNDYEWWASK WYIEDTNEWYIKEHGLDEEDNPTDEIYSCDLDKEGVWIETNEPNDIKELGDNDELGNVVLGNPEFGDLKRYGDGIFKYTS FREALLLDLDFKEPYCIASTEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21609; Mature: 21478
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNTGYDKCELCGEMINIYNARLGFKDNNEKLHNFCMQHERTKELDLKIKELNKGSDDI CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCEEEEECCCCCHHH KFIHKGISVYRMNDYEWWASKWYIEDTNEWYIKEHGLDEEDNPTDEIYSCDLDKEGVWIE HHHHCCEEEEEECCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCCCCEEEE TNEPNDIKELGDNDELGNVVLGNPEFGDLKRYGDGIFKYTSFREALLLDLDFKEPYCIAS CCCCCHHHHCCCCCCCCCEEECCCCCCHHHHHCCCCEEHHHCCEEEEEEECCCCCEEEEC TEW CCC >Mature Secondary Structure SNNTGYDKCELCGEMINIYNARLGFKDNNEKLHNFCMQHERTKELDLKIKELNKGSDDI CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCEEEEECCCCCHHH KFIHKGISVYRMNDYEWWASKWYIEDTNEWYIKEHGLDEEDNPTDEIYSCDLDKEGVWIE HHHHCCEEEEEECCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCCCCEEEE TNEPNDIKELGDNDELGNVVLGNPEFGDLKRYGDGIFKYTSFREALLLDLDFKEPYCIAS CCCCCHHHHCCCCCCCCCEEECCCCCCHHHHHCCCCEEHHHCCEEEEEEECCCCCEEEEC TEW CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA