| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is glnA [H]
Identifier: 187933927
GI number: 187933927
Start: 78671
End: 80563
Strand: Reverse
Name: glnA [H]
Synonym: CLL_A0073
Alternate gene names: 187933927
Gene position: 80563-78671 (Counterclockwise)
Preceding gene: 187934625
Following gene: 187935260
Centisome position: 2.12
GC content: 28.63
Gene sequence:
>1893_bases ATGAATAATTTACTTTATGTTATTAAAAAAGAGAATCATAACGCTAAAGACCTAAATGCAATATTGAATGAGAACAGCCA AATTAAGTTTGTTTCATTTGTTGGTATTGATTTATCTGGTAATGATACTGATGAAAAAATACCTGTTAAACTTTTCTTAG AAAATATAGATTCATATTTAAATGGAATTGCGGTTCAAACAGATGGTTCTTCCGTTGTATTGCCTGGCATTGCTACATTA AACAATGCTAAAGTTGATATGATTACTGATCTAGACAGTAAATGGTTTGTTGATTATAACTTTAATTTTACAGACCCTGA AACTAGCAAACCTGTAGGTACATTAAGAATACCATGTTTCTTATACCATGATAATAAACCTGTTGATTCTAGACATATTC TTAAGGCATCTGCCTCTACAGTTAAAGAAACCCTTTCTAACCTTTTTAAAAACAAACCTGAACTTTTAAATGTTTATGAT ATTACCCCTGATGATATAGATGATATAATCGTTACTTCTGCTACTGAATTAGAATTTTGGGTTAAAACACCTAATGAAAA TGCTGAAGTAGAAGAATTATCAACTTCTCAAGTACTACATGAACATTATTGGACAAGAACTAAAGGTTCAGTAAGAACTG CACTTGAAGAAACACTTCTTTTAATGGAAAAATATGATTTTGAACCTGAAATGGGTCATAAAGAAGTTGGTGGAGTAAGA GCCAAATTAAATTCATCTGGTAACTTCGATCACGTTATGGAACAAATAGAAATAGATTGGAAATATTCTGACGTTCTTCA AGCTGCTGATAATGAGCTATTTGTAAGAATATTGACTCAAGAAACATTTAGAAGAAATGGACTTGAAGTAACATTCATGG CTAAACCAATAGAAGAAGTAGCTGGATCTGGAATGCATGTTCATTTAAGTATTAGTTTAAAATTAAAGAACGGAAAAAGA ATAAACATATTTAATGGACCTAAAAACCATTTCTTAAGTGTAATAGGATATGGAGCTATAATGGGAGTTCTTAAAAATTA TGAAGTTATGAATCCATTTATTTCTTCAACAAACAACTCATTAAGAAGATTAAAACCAGGATTTGAAGCACCTGTATGTA TAGTAACTTCACTTGGTAAAAGTCCTGAAAATCCATCAAGAAATAGATCTATATTAGTTGGATTAATTAGAGATTTAGAT TCTCCTTTAGCTACTAGATTTGAGCTTAGATCTCCAAATCCACATACAAATACTTATATTGCGATGGCTGTTTCTTTCAT GTCAATGCTTGATGGTATATTGTATGCTGTAAATAAAACAGAAGATGAATTACTTGCTGAATTGTCAAAAAAATCAGGTG AGGATGCAGATTATCTTGAAAAAGAAAGAGCTTATAGAAGTGAAGAAGATGTATTTGAAGACTTCTCTGAAGAAGAAAGA AATAAATTCTTCGGTATAGCTCCTGCAACTATTTATGAAAATTTATCACAATTAGAAAAATATCCTGAAAAAGTTGAAAT ATTAAAGAAAAATAATGTAATGACATCTGATATAATAAACAGTTTTAAGTTAGCTACGTTACAAAGATGGACTACTGAAA TCATTCATAGAATTATTAATAATTATATTAATGAAATAAGATCATTTGCACCTCTTCATTCATTAGATAAAGCCTTAGAT TTGGATATATCTAATTGGATGAAAATAAATGATTTAAGAATGTATATAATGAAAGATACTTATACAACTAAAGGTTTATT TACAAGAATTAAAATAGCCTTTATAAATAAAGATTACGAAACAGCATCAGAATTATATATTGAACTTGAAGATAAGATGA AACTTCTTAGAAGTCTATATTCTTCTTACAAAAAAAATCTTTTAGATATATAA
Upstream 100 bases:
>100_bases TGTTTTTTTTATCATTTGTTCGACATGAATTGAAATCAAATTTAAATTGTGAAAGGATGTGAATAGCAACTTACAGAATT ATCTGTAACTGCTTATTATT
Downstream 100 bases:
>100_bases ACAGAATTTCTATTAACTTTTTAGATTTAATTAGTTAAATGTAACTTATACTAAAATTAAAATATCTATAGAATTTATTA ATCTTAGATATTCTATAAAT
Product: glutamine synthetase
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MNNLLYVIKKENHNAKDLNAILNENSQIKFVSFVGIDLSGNDTDEKIPVKLFLENIDSYLNGIAVQTDGSSVVLPGIATL NNAKVDMITDLDSKWFVDYNFNFTDPETSKPVGTLRIPCFLYHDNKPVDSRHILKASASTVKETLSNLFKNKPELLNVYD ITPDDIDDIIVTSATELEFWVKTPNENAEVEELSTSQVLHEHYWTRTKGSVRTALEETLLLMEKYDFEPEMGHKEVGGVR AKLNSSGNFDHVMEQIEIDWKYSDVLQAADNELFVRILTQETFRRNGLEVTFMAKPIEEVAGSGMHVHLSISLKLKNGKR INIFNGPKNHFLSVIGYGAIMGVLKNYEVMNPFISSTNNSLRRLKPGFEAPVCIVTSLGKSPENPSRNRSILVGLIRDLD SPLATRFELRSPNPHTNTYIAMAVSFMSMLDGILYAVNKTEDELLAELSKKSGEDADYLEKERAYRSEEDVFEDFSEEER NKFFGIAPATIYENLSQLEKYPEKVEILKKNNVMTSDIINSFKLATLQRWTTEIIHRIINNYINEIRSFAPLHSLDKALD LDISNWMKINDLRMYIMKDTYTTKGLFTRIKIAFINKDYETASELYIELEDKMKLLRSLYSSYKKNLLDI
Sequences:
>Translated_630_residues MNNLLYVIKKENHNAKDLNAILNENSQIKFVSFVGIDLSGNDTDEKIPVKLFLENIDSYLNGIAVQTDGSSVVLPGIATL NNAKVDMITDLDSKWFVDYNFNFTDPETSKPVGTLRIPCFLYHDNKPVDSRHILKASASTVKETLSNLFKNKPELLNVYD ITPDDIDDIIVTSATELEFWVKTPNENAEVEELSTSQVLHEHYWTRTKGSVRTALEETLLLMEKYDFEPEMGHKEVGGVR AKLNSSGNFDHVMEQIEIDWKYSDVLQAADNELFVRILTQETFRRNGLEVTFMAKPIEEVAGSGMHVHLSISLKLKNGKR INIFNGPKNHFLSVIGYGAIMGVLKNYEVMNPFISSTNNSLRRLKPGFEAPVCIVTSLGKSPENPSRNRSILVGLIRDLD SPLATRFELRSPNPHTNTYIAMAVSFMSMLDGILYAVNKTEDELLAELSKKSGEDADYLEKERAYRSEEDVFEDFSEEER NKFFGIAPATIYENLSQLEKYPEKVEILKKNNVMTSDIINSFKLATLQRWTTEIIHRIINNYINEIRSFAPLHSLDKALD LDISNWMKINDLRMYIMKDTYTTKGLFTRIKIAFINKDYETASELYIELEDKMKLLRSLYSSYKKNLLDI >Mature_630_residues MNNLLYVIKKENHNAKDLNAILNENSQIKFVSFVGIDLSGNDTDEKIPVKLFLENIDSYLNGIAVQTDGSSVVLPGIATL NNAKVDMITDLDSKWFVDYNFNFTDPETSKPVGTLRIPCFLYHDNKPVDSRHILKASASTVKETLSNLFKNKPELLNVYD ITPDDIDDIIVTSATELEFWVKTPNENAEVEELSTSQVLHEHYWTRTKGSVRTALEETLLLMEKYDFEPEMGHKEVGGVR AKLNSSGNFDHVMEQIEIDWKYSDVLQAADNELFVRILTQETFRRNGLEVTFMAKPIEEVAGSGMHVHLSISLKLKNGKR INIFNGPKNHFLSVIGYGAIMGVLKNYEVMNPFISSTNNSLRRLKPGFEAPVCIVTSLGKSPENPSRNRSILVGLIRDLD SPLATRFELRSPNPHTNTYIAMAVSFMSMLDGILYAVNKTEDELLAELSKKSGEDADYLEKERAYRSEEDVFEDFSEEER NKFFGIAPATIYENLSQLEKYPEKVEILKKNNVMTSDIINSFKLATLQRWTTEIIHRIINNYINEIRSFAPLHSLDKALD LDISNWMKINDLRMYIMKDTYTTKGLFTRIKIAFINKDYETASELYIELEDKMKLLRSLYSSYKKNLLDI
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=225, Percent_Identity=33.7777777777778, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 71985; Mature: 71985
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLLYVIKKENHNAKDLNAILNENSQIKFVSFVGIDLSGNDTDEKIPVKLFLENIDSYL CCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHH NGIAVQTDGSSVVLPGIATLNNAKVDMITDLDSKWFVDYNFNFTDPETSKPVGTLRIPCF CCEEEEECCCEEEECCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEE LYHDNKPVDSRHILKASASTVKETLSNLFKNKPELLNVYDITPDDIDDIIVTSATELEFW EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHEEECCCEEEEE VKTPNENAEVEELSTSQVLHEHYWTRTKGSVRTALEETLLLMEKYDFEPEMGHKEVGGVR EECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEE AKLNSSGNFDHVMEQIEIDWKYSDVLQAADNELFVRILTQETFRRNGLEVTFMAKPIEEV EEECCCCCHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHHHHHHCCCCEEEEEECCHHHH AGSGMHVHLSISLKLKNGKRINIFNGPKNHFLSVIGYGAIMGVLKNYEVMNPFISSTNNS CCCCEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHCHHHHCCCCH LRRLKPGFEAPVCIVTSLGKSPENPSRNRSILVGLIRDLDSPLATRFELRSPNPHTNTYI HHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHH AMAVSFMSMLDGILYAVNKTEDELLAELSKKSGEDADYLEKERAYRSEEDVFEDFSEEER HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC NKFFGIAPATIYENLSQLEKYPEKVEILKKNNVMTSDIINSFKLATLQRWTTEIIHRIIN CCEEECCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NYINEIRSFAPLHSLDKALDLDISNWMKINDLRMYIMKDTYTTKGLFTRIKIAFINKDYE HHHHHHHHHCCHHHHHHHHCCCHHHCEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCHH TASELYIELEDKMKLLRSLYSSYKKNLLDI CHHHHEEEEHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNLLYVIKKENHNAKDLNAILNENSQIKFVSFVGIDLSGNDTDEKIPVKLFLENIDSYL CCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHH NGIAVQTDGSSVVLPGIATLNNAKVDMITDLDSKWFVDYNFNFTDPETSKPVGTLRIPCF CCEEEEECCCEEEECCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEE LYHDNKPVDSRHILKASASTVKETLSNLFKNKPELLNVYDITPDDIDDIIVTSATELEFW EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHEEECCCEEEEE VKTPNENAEVEELSTSQVLHEHYWTRTKGSVRTALEETLLLMEKYDFEPEMGHKEVGGVR EECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEE AKLNSSGNFDHVMEQIEIDWKYSDVLQAADNELFVRILTQETFRRNGLEVTFMAKPIEEV EEECCCCCHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHHHHHHCCCCEEEEEECCHHHH AGSGMHVHLSISLKLKNGKRINIFNGPKNHFLSVIGYGAIMGVLKNYEVMNPFISSTNNS CCCCEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHCHHHHCCCCH LRRLKPGFEAPVCIVTSLGKSPENPSRNRSILVGLIRDLDSPLATRFELRSPNPHTNTYI HHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHH AMAVSFMSMLDGILYAVNKTEDELLAELSKKSGEDADYLEKERAYRSEEDVFEDFSEEER HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC NKFFGIAPATIYENLSQLEKYPEKVEILKKNNVMTSDIINSFKLATLQRWTTEIIHRIIN CCEEECCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NYINEIRSFAPLHSLDKALDLDISNWMKINDLRMYIMKDTYTTKGLFTRIKIAFINKDYE HHHHHHHHHCCHHHHHHHHCCCHHHCEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCHH TASELYIELEDKMKLLRSLYSSYKKNLLDI CHHHHEEEEHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7916055 [H]