Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is ykvI [H]

Identifier: 187933911

GI number: 187933911

Start: 87980

End: 89038

Strand: Reverse

Name: ykvI [H]

Synonym: CLL_A0081

Alternate gene names: 187933911

Gene position: 89038-87980 (Counterclockwise)

Preceding gene: 187933779

Following gene: 187934625

Centisome position: 2.34

GC content: 26.72

Gene sequence:

>1059_bases
TTGAAAAAGAGTTTTGTTAATATATTTCAAGTTGCAGTAGTTTTCATAGGTACTATTGTTGGAGCTGGATTAGCTTCAGG
AAAAGAAATCACTGAATTTTTTACGTCTTTTGGACTAAAAAGTTTTTTTGGCATCATAGTCTGTGGAATATTTTATATTG
TAATTGGATGTATAATCGCCAAAATAAGTATTCATTATGAGTTAAATTCTTATAGTGATTTGATTAATGTAATAAGCCCT
AATTATTTGGGTAAATTTACAGGTTTTATAACTACTTTATATCTTATTTCAAGTGCCTCTATAATTTTAGCTGGTAGTGG
TGCTCTTATAAATCAATTTTTTGGGATTCCTAAATTAGTTGGATCAATAATAATGATTTGCATAGCTATATTTTTCTTAT
TAAGAGATACTGATGGATTAATTGCAGTAAATTCATTTATCGTTCCATCTTTAATTTGCACAATAACATTGATTACTATT
TTATACTTTGTATTTTCTAGAGATGCGGTTTCTTTAGAAAGCATGAGACAATTCAAACCTATTAAGAGTGGACTTGCTAT
ATCAACTATATTATATGCTGGTTATAATACGCTTTGTTGTACTGGTGTACTAGTTCCTCTAAGCAATCAAATGAAAAAAC
CTAAAACTATGTTTATAGGAATTACTCTTGGAGCTATTGGATTAACTTTGCTTTGTTTAGCAATAAATCTTATGTTAACA
GTAAATCAACCTTATATATACAAATTTGAAATTCCATTACTTCTTGTTGCAAATAGATTTGGTTGCATAATACAAGCTAT
ATTATTAGTGATTATTTGGCTTGAAATGTTTTCTACTGAAGTTTCAGATGTTTATTCAATAAGTAAAACATTAGAGCAAA
CTTTCAATATAGACTTTAAAAAAGGCATTTTTATAATTTTAGCAATAGCCTTACCAATATCTCAAATTGGATTTAGTAAT
TTAATAACAAAATTATATCCAGCTTTTGGAGTATTAAGTTTAGTATTCATACTACAAAGTGTTATATTTTACTTTAAACA
TAGAAAGGAATTAAAGTAA

Upstream 100 bases:

>100_bases
TTTTTCCTAAGAAATGTAGTGTTATACGAGGAATTTAAGAATAAAAGATAAGTTTACATTATATACTTATTAGTGAAAAT
ATTGTTAAGGAGAATTAAAA

Downstream 100 bases:

>100_bases
TGTTGATATGTATATAAGTAAAATAGACGGCTTAATTAAACTTAAAAGTTCTAAATATTAACATTTTAAAACATAATCAT
TAAATAATATCTCATGATAT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKKSFVNIFQVAVVFIGTIVGAGLASGKEITEFFTSFGLKSFFGIIVCGIFYIVIGCIIAKISIHYELNSYSDLINVISP
NYLGKFTGFITTLYLISSASIILAGSGALINQFFGIPKLVGSIIMICIAIFFLLRDTDGLIAVNSFIVPSLICTITLITI
LYFVFSRDAVSLESMRQFKPIKSGLAISTILYAGYNTLCCTGVLVPLSNQMKKPKTMFIGITLGAIGLTLLCLAINLMLT
VNQPYIYKFEIPLLLVANRFGCIIQAILLVIIWLEMFSTEVSDVYSISKTLEQTFNIDFKKGIFIILAIALPISQIGFSN
LITKLYPAFGVLSLVFILQSVIFYFKHRKELK

Sequences:

>Translated_352_residues
MKKSFVNIFQVAVVFIGTIVGAGLASGKEITEFFTSFGLKSFFGIIVCGIFYIVIGCIIAKISIHYELNSYSDLINVISP
NYLGKFTGFITTLYLISSASIILAGSGALINQFFGIPKLVGSIIMICIAIFFLLRDTDGLIAVNSFIVPSLICTITLITI
LYFVFSRDAVSLESMRQFKPIKSGLAISTILYAGYNTLCCTGVLVPLSNQMKKPKTMFIGITLGAIGLTLLCLAINLMLT
VNQPYIYKFEIPLLLVANRFGCIIQAILLVIIWLEMFSTEVSDVYSISKTLEQTFNIDFKKGIFIILAIALPISQIGFSN
LITKLYPAFGVLSLVFILQSVIFYFKHRKELK
>Mature_352_residues
MKKSFVNIFQVAVVFIGTIVGAGLASGKEITEFFTSFGLKSFFGIIVCGIFYIVIGCIIAKISIHYELNSYSDLINVISP
NYLGKFTGFITTLYLISSASIILAGSGALINQFFGIPKLVGSIIMICIAIFFLLRDTDGLIAVNSFIVPSLICTITLITI
LYFVFSRDAVSLESMRQFKPIKSGLAISTILYAGYNTLCCTGVLVPLSNQMKKPKTMFIGITLGAIGLTLLCLAINLMLT
VNQPYIYKFEIPLLLVANRFGCIIQAILLVIIWLEMFSTEVSDVYSISKTLEQTFNIDFKKGIFIILAIALPISQIGFSN
LITKLYPAFGVLSLVFILQSVIFYFKHRKELK

Specific function: Unknown

COG id: COG3949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38845; Mature: 38845

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSFVNIFQVAVVFIGTIVGAGLASGKEITEFFTSFGLKSFFGIIVCGIFYIVIGCIIA
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KISIHYELNSYSDLINVISPNYLGKFTGFITTLYLISSASIILAGSGALINQFFGIPKLV
HHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCHHHHH
GSIIMICIAIFFLLRDTDGLIAVNSFIVPSLICTITLITILYFVFSRDAVSLESMRQFKP
HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IKSGLAISTILYAGYNTLCCTGVLVPLSNQMKKPKTMFIGITLGAIGLTLLCLAINLMLT
HHCCHHHHHHHHHCCCHHHHHHHHHCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHC
VNQPYIYKFEIPLLLVANRFGCIIQAILLVIIWLEMFSTEVSDVYSISKTLEQTFNIDFK
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KGIFIILAIALPISQIGFSNLITKLYPAFGVLSLVFILQSVIFYFKHRKELK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSFVNIFQVAVVFIGTIVGAGLASGKEITEFFTSFGLKSFFGIIVCGIFYIVIGCIIA
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KISIHYELNSYSDLINVISPNYLGKFTGFITTLYLISSASIILAGSGALINQFFGIPKLV
HHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCHHHHH
GSIIMICIAIFFLLRDTDGLIAVNSFIVPSLICTITLITILYFVFSRDAVSLESMRQFKP
HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IKSGLAISTILYAGYNTLCCTGVLVPLSNQMKKPKTMFIGITLGAIGLTLLCLAINLMLT
HHCCHHHHHHHHHCCCHHHHHHHHHCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHC
VNQPYIYKFEIPLLLVANRFGCIIQAILLVIIWLEMFSTEVSDVYSISKTLEQTFNIDFK
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KGIFIILAIALPISQIGFSNLITKLYPAFGVLSLVFILQSVIFYFKHRKELK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]