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The map label for this gene is yhbA [H]

Identifier: 187933870

GI number: 187933870

Start: 3183997

End: 3185001

Strand: Reverse

Name: yhbA [H]

Synonym: CLL_A3078

Alternate gene names: 187933870

Gene position: 3185001-3183997 (Counterclockwise)

Preceding gene: 187932641

Following gene: 187932810

Centisome position: 83.81

GC content: 26.37

Gene sequence:

>1005_bases
ATGATGGGCGTAAAAGATCAAATAATTAAAACCTGTTCTTCTTTAGGTATAGATTCAATAGGTTTTATAAAGTGTAGAAG
GTTTGATGAACTAAAGAACTTTTATAAAGATAGAAAAGATTTAAATTTGCAAAATGAATTTGAAGAGGATGATATAGAGA
AAAGAATAAATCCAATTCAATATTTAGAAGAGGGGAAAACTATAATTTCTATAGCTTTCCCTTATTTAACGTCTGAGTCA
AATAATAATAACGGTTTTTCTGTATATACAAAGGGAATGGATTATCACTATGTAGTAAATAAATACTTAAAAATTATTTG
CGAAATCATAGAATCACATGGTGGAAAAGCAAAAAGTTTTGTTGATAGCAACTCATTACCTGAAAGATACATAGCTTATT
TATGTGGAGTTGGATTTATTGGGAAAAACAATTTACTTATAAATAAGAAATATGGATCATATATTTTCTTAGGTGAAATA
ATAACGGATTTGGAGATTTATGATGAGGATAATGGTACATTTGAAGATCTAAATTTATTTAAGGAATGTGGTGAATGTAA
GGACTGCTATGTCTCATGTCCAACTAAGGCCATTAATTCTAACAAAAAAAATTGTAATATATGTTTATCTTATATTACTC
AAAAAAAAGATTTAGAAGATTGGGAAATAGAAAAATTGCAAGGTAGAATGTTTGGGTGTGATACATGTCAATTGGTATGC
CGTTATAATATAGATAAAGAATTATCTAAAATACCAGAATTTATGCCTTTTGATTTCATGATTAATAATAATGAAGAAGT
TATTATTGCTATGGGAAATGGACAATTTAAGGAAAGTTATAAGAATACATCTTGTGGATGGAGAGGAAAAAATATTTTAA
AAAGAAATGCTTTGATTAGAAGCAAACTTTACTTAAAGAGTAATAATTTTGCTCAAAATCAAAAGTTTGAATCTCCATAT
TTAAATGAGTATATAAATAGACTTTTCCAAAAAACTAGAATATAA

Upstream 100 bases:

>100_bases
CTAGAAACATTGTTAGAACTAAAGCTTCTATAATTGAAATAGAAGATTTAAAAGGAATAAAGAAAAAAATTTATAATGAA
ATGATAATTTAGAGGAATAT

Downstream 100 bases:

>100_bases
TTATTATATATAAAGAGATATAGAGATTGAAGCGGGAGTGAGAAATATGCTATCACCAACTATAGTAAAAATATTAGAAA
TGTTACCAGAAAGTTTTCTT

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MMGVKDQIIKTCSSLGIDSIGFIKCRRFDELKNFYKDRKDLNLQNEFEEDDIEKRINPIQYLEEGKTIISIAFPYLTSES
NNNNGFSVYTKGMDYHYVVNKYLKIICEIIESHGGKAKSFVDSNSLPERYIAYLCGVGFIGKNNLLINKKYGSYIFLGEI
ITDLEIYDEDNGTFEDLNLFKECGECKDCYVSCPTKAINSNKKNCNICLSYITQKKDLEDWEIEKLQGRMFGCDTCQLVC
RYNIDKELSKIPEFMPFDFMINNNEEVIIAMGNGQFKESYKNTSCGWRGKNILKRNALIRSKLYLKSNNFAQNQKFESPY
LNEYINRLFQKTRI

Sequences:

>Translated_334_residues
MMGVKDQIIKTCSSLGIDSIGFIKCRRFDELKNFYKDRKDLNLQNEFEEDDIEKRINPIQYLEEGKTIISIAFPYLTSES
NNNNGFSVYTKGMDYHYVVNKYLKIICEIIESHGGKAKSFVDSNSLPERYIAYLCGVGFIGKNNLLINKKYGSYIFLGEI
ITDLEIYDEDNGTFEDLNLFKECGECKDCYVSCPTKAINSNKKNCNICLSYITQKKDLEDWEIEKLQGRMFGCDTCQLVC
RYNIDKELSKIPEFMPFDFMINNNEEVIIAMGNGQFKESYKNTSCGWRGKNILKRNALIRSKLYLKSNNFAQNQKFESPY
LNEYINRLFQKTRI
>Mature_334_residues
MMGVKDQIIKTCSSLGIDSIGFIKCRRFDELKNFYKDRKDLNLQNEFEEDDIEKRINPIQYLEEGKTIISIAFPYLTSES
NNNNGFSVYTKGMDYHYVVNKYLKIICEIIESHGGKAKSFVDSNSLPERYIAYLCGVGFIGKNNLLINKKYGSYIFLGEI
ITDLEIYDEDNGTFEDLNLFKECGECKDCYVSCPTKAINSNKKNCNICLSYITQKKDLEDWEIEKLQGRMFGCDTCQLVC
RYNIDKELSKIPEFMPFDFMINNNEEVIIAMGNGQFKESYKNTSCGWRGKNILKRNALIRSKLYLKSNNFAQNQKFESPY
LNEYINRLFQKTRI

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=215, Percent_Identity=32.093023255814, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 38873; Mature: 38873

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGVKDQIIKTCSSLGIDSIGFIKCRRFDELKNFYKDRKDLNLQNEFEEDDIEKRINPIQ
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHH
YLEEGKTIISIAFPYLTSESNNNNGFSVYTKGMDYHYVVNKYLKIICEIIESHGGKAKSF
HHHCCCEEEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
VDSNSLPERYIAYLCGVGFIGKNNLLINKKYGSYIFLGEIITDLEIYDEDNGTFEDLNLF
CCCCCCHHHHHHHHHCCCEECCCCEEEEECCCCEEEEHHHHHHHEEEECCCCCHHHHHHH
KECGECKDCYVSCPTKAINSNKKNCNICLSYITQKKDLEDWEIEKLQGRMFGCDTCQLVC
HHCCCCCHHEEECCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHH
RYNIDKELSKIPEFMPFDFMINNNEEVIIAMGNGQFKESYKNTSCGWRGKNILKRNALIR
HCCCCHHHHHCCCCCCEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHH
SKLYLKSNNFAQNQKFESPYLNEYINRLFQKTRI
HHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMGVKDQIIKTCSSLGIDSIGFIKCRRFDELKNFYKDRKDLNLQNEFEEDDIEKRINPIQ
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHH
YLEEGKTIISIAFPYLTSESNNNNGFSVYTKGMDYHYVVNKYLKIICEIIESHGGKAKSF
HHHCCCEEEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
VDSNSLPERYIAYLCGVGFIGKNNLLINKKYGSYIFLGEIITDLEIYDEDNGTFEDLNLF
CCCCCCHHHHHHHHHCCCEECCCCEEEEECCCCEEEEHHHHHHHEEEECCCCCHHHHHHH
KECGECKDCYVSCPTKAINSNKKNCNICLSYITQKKDLEDWEIEKLQGRMFGCDTCQLVC
HHCCCCCHHEEECCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHH
RYNIDKELSKIPEFMPFDFMINNNEEVIIAMGNGQFKESYKNTSCGWRGKNILKRNALIR
HCCCCHHHHHCCCCCCEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHH
SKLYLKSNNFAQNQKFESPYLNEYINRLFQKTRI
HHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]