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The map label for this gene is ccpA [H]

Identifier: 187933654

GI number: 187933654

Start: 2120578

End: 2121495

Strand: Reverse

Name: ccpA [H]

Synonym: CLL_A2026

Alternate gene names: 187933654

Gene position: 2121495-2120578 (Counterclockwise)

Preceding gene: 187935207

Following gene: 187934650

Centisome position: 55.82

GC content: 24.18

Gene sequence:

>918_bases
ATGACTAATAGAAAGGTAACGTTAAAAGATATTGCAAAAGAGGCTAATGTTTCACCAGCTACAGTATCGTATGTTTTGAA
TTATTCTGAAAAAGAAAAAATAAGCCATGAAACAAGATTAAAAGTGTTTGAAGCTGCTAGAAAACTAAATTATGTTCCTA
ATATGACAGCGCGTTCTTTAGCAAGTCAAAAAAGTTATTTAATAGGTGTAATTATTAACTTAAGTGAAAAAAATAGAAAA
AGTAAGATATATGGGCAATATAATTTGGTAAAAGAAATTCAAAAGAAACTTTATTCAATAGGATATGATTTGATTTTCTT
GCCAACAAAGGAACTTCAAAAAGATATTCAAATTAGTCAGAAAAGATGTTTAGATGCTGTATTTATCATAGATATGCCTT
CAGATCAGCTAAAAGAGATAGTAAATCATTTTTATGTTCCAGTTATTTTTATTGATAGTTATTTAGATGATCCTATTTTT
AATAAAGTGCTAACAGATTATGAAGCTATCTTTAATATGTTAAGTGAGCAATTGGAAAAAGAATTTTATGTAGTAATAGA
AGATTACTCTAATGATGAACTTCTTAAAATTGTAAGAAAAAAAGTATTGGAAAAAAATATTTTTATTAATAAATTTGATA
ATGATTTAATTGAATTTTTACATAGGAATCAAAACAAAAAAGGAATAATATTTGGAGAAATATTAGGTATGCAGGCAGAA
AAAATTGTAGATAATAGAAATTTAGTTGTAGTAATAAATTCGGAAAATGATACAATGCTTTTGCCAGATACTAAAAGAAT
TATAGTTAGTGATAAAGAAAAAGCTAAAAAAGCAGTTGAAATTATGGAAAAATTAATTTATTTAGAAAATGATAAAGATA
TTGAAAAAACATCATATATAAAACCAATAGAATACTAA

Upstream 100 bases:

>100_bases
ATTACGTTGTAATTAGTTATTATATATGCCTATAGTATAGAATACTTGTTAAAAAAACAGAGCACATGATATAATAATTT
TAAATTAAAGGAGGCTTTAT

Downstream 100 bases:

>100_bases
TTAATATGTAATTGTAAAGTGTGGATAAAAATTCACACTTTTTGTTTTGGAGAAATTTATAAATATTTTAATTTAATAAG
ACTATGTTTTAGCAGAGTGT

Product: LacI family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTNRKVTLKDIAKEANVSPATVSYVLNYSEKEKISHETRLKVFEAARKLNYVPNMTARSLASQKSYLIGVIINLSEKNRK
SKIYGQYNLVKEIQKKLYSIGYDLIFLPTKELQKDIQISQKRCLDAVFIIDMPSDQLKEIVNHFYVPVIFIDSYLDDPIF
NKVLTDYEAIFNMLSEQLEKEFYVVIEDYSNDELLKIVRKKVLEKNIFINKFDNDLIEFLHRNQNKKGIIFGEILGMQAE
KIVDNRNLVVVINSENDTMLLPDTKRIIVSDKEKAKKAVEIMEKLIYLENDKDIEKTSYIKPIEY

Sequences:

>Translated_305_residues
MTNRKVTLKDIAKEANVSPATVSYVLNYSEKEKISHETRLKVFEAARKLNYVPNMTARSLASQKSYLIGVIINLSEKNRK
SKIYGQYNLVKEIQKKLYSIGYDLIFLPTKELQKDIQISQKRCLDAVFIIDMPSDQLKEIVNHFYVPVIFIDSYLDDPIF
NKVLTDYEAIFNMLSEQLEKEFYVVIEDYSNDELLKIVRKKVLEKNIFINKFDNDLIEFLHRNQNKKGIIFGEILGMQAE
KIVDNRNLVVVINSENDTMLLPDTKRIIVSDKEKAKKAVEIMEKLIYLENDKDIEKTSYIKPIEY
>Mature_304_residues
TNRKVTLKDIAKEANVSPATVSYVLNYSEKEKISHETRLKVFEAARKLNYVPNMTARSLASQKSYLIGVIINLSEKNRKS
KIYGQYNLVKEIQKKLYSIGYDLIFLPTKELQKDIQISQKRCLDAVFIIDMPSDQLKEIVNHFYVPVIFIDSYLDDPIFN
KVLTDYEAIFNMLSEQLEKEFYVVIEDYSNDELLKIVRKKVLEKNIFINKFDNDLIEFLHRNQNKKGIIFGEILGMQAEK
IVDNRNLVVVINSENDTMLLPDTKRIIVSDKEKAKKAVEIMEKLIYLENDKDIEKTSYIKPIEY

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes and in the positive regulation of genes involved in excretion of excess carbon [H]

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790194, Length=154, Percent_Identity=27.9220779220779, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787948, Length=154, Percent_Identity=29.8701298701299, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 35656; Mature: 35525

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRKVTLKDIAKEANVSPATVSYVLNYSEKEKISHETRLKVFEAARKLNYVPNMTARSL
CCCCEEHHHHHHHHCCCCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ASQKSYLIGVIINLSEKNRKSKIYGQYNLVKEIQKKLYSIGYDLIFLPTKELQKDIQISQ
HHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
KRCLDAVFIIDMPSDQLKEIVNHFYVPVIFIDSYLDDPIFNKVLTDYEAIFNMLSEQLEK
HHHCEEEEEEECCHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCC
EFYVVIEDYSNDELLKIVRKKVLEKNIFINKFDNDLIEFLHRNQNKKGIIFGEILGMQAE
CEEEEEECCCCHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCEEEHHHHCCHHH
KIVDNRNLVVVINSENDTMLLPDTKRIIVSDKEKAKKAVEIMEKLIYLENDKDIEKTSYI
HHHCCCCEEEEEECCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
KPIEY
CCCCC
>Mature Secondary Structure 
TNRKVTLKDIAKEANVSPATVSYVLNYSEKEKISHETRLKVFEAARKLNYVPNMTARSL
CCCEEHHHHHHHHCCCCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ASQKSYLIGVIINLSEKNRKSKIYGQYNLVKEIQKKLYSIGYDLIFLPTKELQKDIQISQ
HHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
KRCLDAVFIIDMPSDQLKEIVNHFYVPVIFIDSYLDDPIFNKVLTDYEAIFNMLSEQLEK
HHHCEEEEEEECCHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCC
EFYVVIEDYSNDELLKIVRKKVLEKNIFINKFDNDLIEFLHRNQNKKGIIFGEILGMQAE
CEEEEEECCCCHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCEEEHHHHCCHHH
KIVDNRNLVVVINSENDTMLLPDTKRIIVSDKEKAKKAVEIMEKLIYLENDKDIEKTSYI
HHHCCCCEEEEEECCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
KPIEY
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8878037 [H]