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The map label for this gene is yclJ [H]

Identifier: 187933594

GI number: 187933594

Start: 3116064

End: 3116720

Strand: Reverse

Name: yclJ [H]

Synonym: CLL_A3016

Alternate gene names: 187933594

Gene position: 3116720-3116064 (Counterclockwise)

Preceding gene: 187934103

Following gene: 187932625

Centisome position: 82.01

GC content: 28.16

Gene sequence:

>657_bases
TTGAAAATAAATGTTTTAATTATAGAAGACGATGAAGCTATTTCTAATTTAATAAAAATAAATTTGAGTATGGTTGGTTA
TAAAAGTAAGCAATTATTTGATGGTTTAGAAGCTTTTAATTTGTTAAAAGAAGAATCTTTTGATCTTATACTAATGGATA
TCATGTTGCCAGGTATGGATGGTTTTGAATTAATGAAAAAAATAAAAGACTTAAATATACCAGTAATATTTCTGACCGCT
AAAAATGGACTTGCAGATAAAGTAACTGGACTTAAATCTGGTGCAGAAGACTATATTGTGAAACCATTTGAAACAGTTGA
GCTACTAGCAAGGATAGAAATAGTTTTAAGGCGTTATTCTAAAAATAGTAATTGTATAGAATTTGGGAATTTGAAAATAT
ATGAAGAAGAAAGGAGTATCAAAAAAGATGATGAGACAATTGATCTTACCTTGAAGGAATTTGAGCTCATGGTTTTGCTT
GTGAAAAATAAAAATATGGCTCTATCAAGGGAATATTTACTAGAAAAGATATGGGGGTACGAATATATGGGAGAAACAAG
GACAATAGATAACCATATTCAAAAGTTAAGAAAGAAGCTGGATATTGCAGATAATATAAAAACTGTATATAAAATTGGAT
ACAGATTAGAGGAGTAA

Upstream 100 bases:

>100_bases
CAACTATTTTAAGATTATTTTGAAAAGTTTGTTATATAATGGAGGTATAAATTAAACATTAACTGAAAAATATTAAGTTA
TTATACTAGGGGGAATATAG

Downstream 100 bases:

>100_bases
TAGATATGAAGTTATGGCAGAAAATATATTTCTTTTCTTTATTATTACTTATAGTTACTTTAAACATAGCTGGATTTATA
TTGATACAAAAACTTCATAA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKINVLIIEDDEAISNLIKINLSMVGYKSKQLFDGLEAFNLLKEESFDLILMDIMLPGMDGFELMKKIKDLNIPVIFLTA
KNGLADKVTGLKSGAEDYIVKPFETVELLARIEIVLRRYSKNSNCIEFGNLKIYEEERSIKKDDETIDLTLKEFELMVLL
VKNKNMALSREYLLEKIWGYEYMGETRTIDNHIQKLRKKLDIADNIKTVYKIGYRLEE

Sequences:

>Translated_218_residues
MKINVLIIEDDEAISNLIKINLSMVGYKSKQLFDGLEAFNLLKEESFDLILMDIMLPGMDGFELMKKIKDLNIPVIFLTA
KNGLADKVTGLKSGAEDYIVKPFETVELLARIEIVLRRYSKNSNCIEFGNLKIYEEERSIKKDDETIDLTLKEFELMVLL
VKNKNMALSREYLLEKIWGYEYMGETRTIDNHIQKLRKKLDIADNIKTVYKIGYRLEE
>Mature_218_residues
MKINVLIIEDDEAISNLIKINLSMVGYKSKQLFDGLEAFNLLKEESFDLILMDIMLPGMDGFELMKKIKDLNIPVIFLTA
KNGLADKVTGLKSGAEDYIVKPFETVELLARIEIVLRRYSKNSNCIEFGNLKIYEEERSIKKDDETIDLTLKEFELMVLL
VKNKNMALSREYLLEKIWGYEYMGETRTIDNHIQKLRKKLDIADNIKTVYKIGYRLEE

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082012, Length=216, Percent_Identity=35.6481481481481, Blast_Score=146, Evalue=8e-37,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=35.5555555555556, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=35.1598173515982, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1789809, Length=224, Percent_Identity=35.2678571428571, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=31.981981981982, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=30.6306306306306, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=31.6964285714286, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=30.7692307692308, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1790552, Length=217, Percent_Identity=33.1797235023041, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=32.8947368421053, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=29.9107142857143, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI2367329, Length=224, Percent_Identity=33.4821428571429, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790299, Length=122, Percent_Identity=32.7868852459016, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI145693140, Length=223, Percent_Identity=28.6995515695067, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1790437, Length=116, Percent_Identity=35.3448275862069, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=31.1320754716981, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI145693157, Length=100, Percent_Identity=33, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787487, Length=148, Percent_Identity=29.0540540540541, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25343; Mature: 25343

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINVLIIEDDEAISNLIKINLSMVGYKSKQLFDGLEAFNLLKEESFDLILMDIMLPGMD
CEEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCC
GFELMKKIKDLNIPVIFLTAKNGLADKVTGLKSGAEDYIVKPFETVELLARIEIVLRRYS
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHC
KNSNCIEFGNLKIYEEERSIKKDDETIDLTLKEFELMVLLVKNKNMALSREYLLEKIWGY
CCCCEEEECCEEEEECCCCCCCCCCEEEEEEEHEEEEEEEEECCCCHHHHHHHHHHHHCC
EYMGETRTIDNHIQKLRKKLDIADNIKTVYKIGYRLEE
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCEECC
>Mature Secondary Structure
MKINVLIIEDDEAISNLIKINLSMVGYKSKQLFDGLEAFNLLKEESFDLILMDIMLPGMD
CEEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCC
GFELMKKIKDLNIPVIFLTAKNGLADKVTGLKSGAEDYIVKPFETVELLARIEIVLRRYS
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHC
KNSNCIEFGNLKIYEEERSIKKDDETIDLTLKEFELMVLLVKNKNMALSREYLLEKIWGY
CCCCEEEECCEEEEECCCCCCCCCCEEEEEEEHEEEEEEEEECCCCHHHHHHHHHHHHCC
EYMGETRTIDNHIQKLRKKLDIADNIKTVYKIGYRLEE
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]