| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187933414
Identifier: 187933414
GI number: 187933414
Start: 3790006
End: 3790518
Strand: Reverse
Name: 187933414
Synonym: CLL_A3594
Alternate gene names: NA
Gene position: 3790518-3790006 (Counterclockwise)
Preceding gene: 187933628
Following gene: 187933029
Centisome position: 99.74
GC content: 25.54
Gene sequence:
>513_bases TTGGAAAAATTATTTGGGATAATTAATCAAATAACACCATATTTAATCATAAGTATGATAGTTATAATTGTTTTATTATT TATTTTAATTTTTGTATTAATTAATTCAATTAACAAATTAGAAAGTAAATACAGAAGATTAATGAGAGGCACAAACGGAA AAAATTTAGAGGAAATGCTGATGGAAAAACTAGATAGTATTGATGATATTAGAGAAACAGCAGAAAATACTTTAAATGAA TGTAGTAAGCTAGAAACAAAAATAAAAGATTGTGTGCAAAAGGTTGCTATTATGAGATACAAAGCTTTTGAAAATGTAGG TAGTGACTTGAGTTTTTCAATTGCTATGCTAGATGACAATAATGATGGAATATTATTAACTGGAATTTATGCACGAGAAG AAAGTACAACATATGCAAAACCAATTGATAAGGGAATATCAAGATATGATCTTTCAGAAGAAGAGCTTTATGTATTAAAT GAAGCCGCTAATAAATATGAAAATAAAAAATAG
Upstream 100 bases:
>100_bases ATAGAGTACTATTCTGAGGAAGATTTACAAAGAATTTTAGACATTATTAATATACAGTAAAATGTTTCACGTGAAACATT TAGTGAAAGGAATGACCTAG
Downstream 100 bases:
>100_bases GTAATCATTAAAGTTAAAATAGCCAATTTAAAATATAATTTATTTTAAATTGGCTATTTTTGCAGCAAATGTAGATAATT ATTAAATTTAAAAATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MEKLFGIINQITPYLIISMIVIIVLLFILIFVLINSINKLESKYRRLMRGTNGKNLEEMLMEKLDSIDDIRETAENTLNE CSKLETKIKDCVQKVAIMRYKAFENVGSDLSFSIAMLDDNNDGILLTGIYAREESTTYAKPIDKGISRYDLSEEELYVLN EAANKYENKK
Sequences:
>Translated_170_residues MEKLFGIINQITPYLIISMIVIIVLLFILIFVLINSINKLESKYRRLMRGTNGKNLEEMLMEKLDSIDDIRETAENTLNE CSKLETKIKDCVQKVAIMRYKAFENVGSDLSFSIAMLDDNNDGILLTGIYAREESTTYAKPIDKGISRYDLSEEELYVLN EAANKYENKK >Mature_170_residues MEKLFGIINQITPYLIISMIVIIVLLFILIFVLINSINKLESKYRRLMRGTNGKNLEEMLMEKLDSIDDIRETAENTLNE CSKLETKIKDCVQKVAIMRYKAFENVGSDLSFSIAMLDDNNDGILLTGIYAREESTTYAKPIDKGISRYDLSEEELYVLN EAANKYENKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19548; Mature: 19548
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLFGIINQITPYLIISMIVIIVLLFILIFVLINSINKLESKYRRLMRGTNGKNLEEML CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH MEKLDSIDDIRETAENTLNECSKLETKIKDCVQKVAIMRYKAFENVGSDLSFSIAMLDDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC NDGILLTGIYAREESTTYAKPIDKGISRYDLSEEELYVLNEAANKYENKK CCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEKLFGIINQITPYLIISMIVIIVLLFILIFVLINSINKLESKYRRLMRGTNGKNLEEML CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH MEKLDSIDDIRETAENTLNECSKLETKIKDCVQKVAIMRYKAFENVGSDLSFSIAMLDDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC NDGILLTGIYAREESTTYAKPIDKGISRYDLSEEELYVLNEAANKYENKK CCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA