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The map label for this gene is 187933401

Identifier: 187933401

GI number: 187933401

Start: 137474

End: 138322

Strand: Reverse

Name: 187933401

Synonym: CLL_A0126

Alternate gene names: NA

Gene position: 138322-137474 (Counterclockwise)

Preceding gene: 187935051

Following gene: 187934509

Centisome position: 3.64

GC content: 29.68

Gene sequence:

>849_bases
GTGGATAAAATTGCATTACTAACTGACAGTGCATCTGATATATGTACTGAGGATCTAAAAAAATATAATATAAAATTATT
ACCTTTTAAAATTATCTTTTCTGATAAAGAATATGATGATAAATTAGAAATAACTTCTGATGTTCTTTATGAATTACTTC
CTAGAGAAATTCCTAAAACATCATTACCAAGTATCGAAAGGCTTAATAATACTCTTAATCAATTAATTGAGGAAGGATAT
ACGCATGCTATTATAGTAACATTATCAAGTGAATTCTCAGGAACATATAATTCAATGAGATTAGCATGTGAAAGTTTTGA
AGGAATAGAGACCTTTGTATATGATTCAAAAAGTTTAAGCATGGCAGAAGGTGTAGTCGTACTAGAAACTGCAAAACTTA
TTGAAGAAGGAAAATCATTTGATGAGATAGTAAAGATAATTCCTGAATTAAGATCCAAAATAGATATATTCTTTACTATA
GATACTTTAGAATACTTAAAAAAAGGTGGAAGAATAGGTAGAGTCGCTGGAACTATAGGTGATGTTCTTAACTTAAAACC
GGTTATAACAATAGATAACAACGGTTGCTTCCATACTTACTGTAAAGCTCGTGGTAAAAAACAATCTGCATCAAAATTAT
TAAAAATTGCTAAATCTTATACCGAGAATAATAAATGTAAATTCTGGGTTATGGATGGTAATGCACTTGATGATGCAAAA
TCATTATGTGAAAATATTAAGAGCTTTGATAATGTAGTAGAGTGCAAGTTAGGATATAGTATAGGTCCTGCACTTGGTGT
TCATACCGGTCCTGGTCTTTTTGGATTCATTGTTGAAAAGGTAGATTAA

Upstream 100 bases:

>100_bases
ATCTAAGAACTTATCACTATCGATAACTATATCACTATTGATATAGTTATCGATAGTGATATAATTAATGAATAGACTAT
ATTACTAGGAGGAATTTTTA

Downstream 100 bases:

>100_bases
TATGTCTGACTTTAATTTTTCTGATATAAATGATATAAAAAATGAAGAAAAAAGATTATATGAAGAATATAAGAGTAAAG
TTTCTGAGTTGAAAAAAGTA

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MDKIALLTDSASDICTEDLKKYNIKLLPFKIIFSDKEYDDKLEITSDVLYELLPREIPKTSLPSIERLNNTLNQLIEEGY
THAIIVTLSSEFSGTYNSMRLACESFEGIETFVYDSKSLSMAEGVVVLETAKLIEEGKSFDEIVKIIPELRSKIDIFFTI
DTLEYLKKGGRIGRVAGTIGDVLNLKPVITIDNNGCFHTYCKARGKKQSASKLLKIAKSYTENNKCKFWVMDGNALDDAK
SLCENIKSFDNVVECKLGYSIGPALGVHTGPGLFGFIVEKVD

Sequences:

>Translated_282_residues
MDKIALLTDSASDICTEDLKKYNIKLLPFKIIFSDKEYDDKLEITSDVLYELLPREIPKTSLPSIERLNNTLNQLIEEGY
THAIIVTLSSEFSGTYNSMRLACESFEGIETFVYDSKSLSMAEGVVVLETAKLIEEGKSFDEIVKIIPELRSKIDIFFTI
DTLEYLKKGGRIGRVAGTIGDVLNLKPVITIDNNGCFHTYCKARGKKQSASKLLKIAKSYTENNKCKFWVMDGNALDDAK
SLCENIKSFDNVVECKLGYSIGPALGVHTGPGLFGFIVEKVD
>Mature_282_residues
MDKIALLTDSASDICTEDLKKYNIKLLPFKIIFSDKEYDDKLEITSDVLYELLPREIPKTSLPSIERLNNTLNQLIEEGY
THAIIVTLSSEFSGTYNSMRLACESFEGIETFVYDSKSLSMAEGVVVLETAKLIEEGKSFDEIVKIIPELRSKIDIFFTI
DTLEYLKKGGRIGRVAGTIGDVLNLKPVITIDNNGCFHTYCKARGKKQSASKLLKIAKSYTENNKCKFWVMDGNALDDAK
SLCENIKSFDNVVECKLGYSIGPALGVHTGPGLFGFIVEKVD

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31442; Mature: 31442

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIALLTDSASDICTEDLKKYNIKLLPFKIIFSDKEYDDKLEITSDVLYELLPREIPKT
CCCEEEEECCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
SLPSIERLNNTLNQLIEEGYTHAIIVTLSSEFSGTYNSMRLACESFEGIETFVYDSKSLS
CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCH
MAEGVVVLETAKLIEEGKSFDEIVKIIPELRSKIDIFFTIDTLEYLKKGGRIGRVAGTIG
HHCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEHHHHHHHCCCCEEEHHHHHH
DVLNLKPVITIDNNGCFHTYCKARGKKQSASKLLKIAKSYTENNKCKFWVMDGNALDDAK
HHHCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
SLCENIKSFDNVVECKLGYSIGPALGVHTGPGLFGFIVEKVD
HHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHECCC
>Mature Secondary Structure
MDKIALLTDSASDICTEDLKKYNIKLLPFKIIFSDKEYDDKLEITSDVLYELLPREIPKT
CCCEEEEECCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
SLPSIERLNNTLNQLIEEGYTHAIIVTLSSEFSGTYNSMRLACESFEGIETFVYDSKSLS
CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCH
MAEGVVVLETAKLIEEGKSFDEIVKIIPELRSKIDIFFTIDTLEYLKKGGRIGRVAGTIG
HHCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEHHHHHHHCCCCEEEHHHHHH
DVLNLKPVITIDNNGCFHTYCKARGKKQSASKLLKIAKSYTENNKCKFWVMDGNALDDAK
HHHCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
SLCENIKSFDNVVECKLGYSIGPALGVHTGPGLFGFIVEKVD
HHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]