| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187933351
Identifier: 187933351
GI number: 187933351
Start: 2479133
End: 2480011
Strand: Reverse
Name: 187933351
Synonym: CLL_A2388
Alternate gene names: NA
Gene position: 2480011-2479133 (Counterclockwise)
Preceding gene: 187932386
Following gene: 187935116
Centisome position: 65.26
GC content: 21.96
Gene sequence:
>879_bases ATGTTATTAGAAACAAAAGAAAAATTTCCTCAATGGTGTAGAGACAAAGAAACTAATTACAAGCTATTATTATCAGATGA TATAGATAGTTTTATGTGTTACATTCTACAAAAGGAATTATTTAATAGAGAAATAGAATATTTTATTGATGTAAATTATA AGAAAATAAATAAAAGCTTTGGTAAACAAGTATTATATTCAACAAATTCAAATATTCAATGGAAGGATATAATTGGTTTA GATATTGCATTAGAAAACAACATAAAATGTTGGGATAATCATGTAACAAAACAATATAGTAATGATAATTATAATTTAAA TAGTGCAAATATGAATAATATTATCAATGTATGTTCAAACAATTATACAAGTAAATTTGTTATTAGTTCTTTCATTACAA TGTTAAGTTATTATGATGTAGATATTACTAAATGGAATAAAGAACAATTAGCTATTTTATGTTGTATAGATGGATTATAT ACACCTTTTTGCAATCAAAGGTTTATGGAACAAGGGAAAGAGAATTTACGCTTTTTAGGTTATGAATTTTTATCTAATTT TATAAAGGAAAATTTGCAATATATAATTAAAATAGAAAGTGAATATAATATAAAGTATGGGAAAATATGCACTGATAATG ATGGTTTCTTACAAACAAATATAGATTTATTGGGATTGCAATTAGCTTTTATTGGTGTATTTAATAGTATTTTTGATTTA CCACATAATAAATTTATGGAAATTGAAAGTTACAAAAGTACATTTGTTAATCTTTCAGATAATAAGTACACTAAAAAAAT TTTAAATAAAAGTGATAGATTGATGAATTTTGCATTACTTTTCAAGAATAAAGCTGTTGTTAGTTATGATGTTGATTAA
Upstream 100 bases:
>100_bases GTGAATTTTAATTAATTTACTATCTTTCTTATTTATTATTAAGAAAGAAGATTTAATTTTTATTATTAACGAAAAAGATA GTTAGATTAATTATCTAATT
Downstream 100 bases:
>100_bases CTTCTAATAACATAATTACAAATTCATTATGGTATATAAATTGCAATTCCCTTTTTAAAAGGGTGATATGTGGATTGTTT GAACCACCACTAGAATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MLLETKEKFPQWCRDKETNYKLLLSDDIDSFMCYILQKELFNREIEYFIDVNYKKINKSFGKQVLYSTNSNIQWKDIIGL DIALENNIKCWDNHVTKQYSNDNYNLNSANMNNIINVCSNNYTSKFVISSFITMLSYYDVDITKWNKEQLAILCCIDGLY TPFCNQRFMEQGKENLRFLGYEFLSNFIKENLQYIIKIESEYNIKYGKICTDNDGFLQTNIDLLGLQLAFIGVFNSIFDL PHNKFMEIESYKSTFVNLSDNKYTKKILNKSDRLMNFALLFKNKAVVSYDVD
Sequences:
>Translated_292_residues MLLETKEKFPQWCRDKETNYKLLLSDDIDSFMCYILQKELFNREIEYFIDVNYKKINKSFGKQVLYSTNSNIQWKDIIGL DIALENNIKCWDNHVTKQYSNDNYNLNSANMNNIINVCSNNYTSKFVISSFITMLSYYDVDITKWNKEQLAILCCIDGLY TPFCNQRFMEQGKENLRFLGYEFLSNFIKENLQYIIKIESEYNIKYGKICTDNDGFLQTNIDLLGLQLAFIGVFNSIFDL PHNKFMEIESYKSTFVNLSDNKYTKKILNKSDRLMNFALLFKNKAVVSYDVD >Mature_292_residues MLLETKEKFPQWCRDKETNYKLLLSDDIDSFMCYILQKELFNREIEYFIDVNYKKINKSFGKQVLYSTNSNIQWKDIIGL DIALENNIKCWDNHVTKQYSNDNYNLNSANMNNIINVCSNNYTSKFVISSFITMLSYYDVDITKWNKEQLAILCCIDGLY TPFCNQRFMEQGKENLRFLGYEFLSNFIKENLQYIIKIESEYNIKYGKICTDNDGFLQTNIDLLGLQLAFIGVFNSIFDL PHNKFMEIESYKSTFVNLSDNKYTKKILNKSDRLMNFALLFKNKAVVSYDVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34528; Mature: 34528
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLETKEKFPQWCRDKETNYKLLLSDDIDSFMCYILQKELFNREIEYFIDVNYKKINKSF CCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH GKQVLYSTNSNIQWKDIIGLDIALENNIKCWDNHVTKQYSNDNYNLNSANMNNIINVCSN CCEEEEECCCCEEEEEEEEEEEEEECCCEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC NYTSKFVISSFITMLSYYDVDITKWNKEQLAILCCIDGLYTPFCNQRFMEQGKENLRFLG CCCHHHHHHHHHHHHHHHCCEEEEECHHHEEEEEEECHHCCHHHHHHHHHCCHHHHHHHH YEFLSNFIKENLQYIIKIESEYNIKYGKICTDNDGFLQTNIDLLGLQLAFIGVFNSIFDL HHHHHHHHHHCCEEEEEECCCCCEEECCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHC PHNKFMEIESYKSTFVNLSDNKYTKKILNKSDRLMNFALLFKNKAVVSYDVD CCCHHEEHHCCHHHEEECCCCHHHHHHHCCHHHHHEEEEEEECCEEEEEECC >Mature Secondary Structure MLLETKEKFPQWCRDKETNYKLLLSDDIDSFMCYILQKELFNREIEYFIDVNYKKINKSF CCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH GKQVLYSTNSNIQWKDIIGLDIALENNIKCWDNHVTKQYSNDNYNLNSANMNNIINVCSN CCEEEEECCCCEEEEEEEEEEEEEECCCEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC NYTSKFVISSFITMLSYYDVDITKWNKEQLAILCCIDGLYTPFCNQRFMEQGKENLRFLG CCCHHHHHHHHHHHHHHHCCEEEEECHHHEEEEEEECHHCCHHHHHHHHHCCHHHHHHHH YEFLSNFIKENLQYIIKIESEYNIKYGKICTDNDGFLQTNIDLLGLQLAFIGVFNSIFDL HHHHHHHHHHCCEEEEEECCCCCEEECCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHC PHNKFMEIESYKSTFVNLSDNKYTKKILNKSDRLMNFALLFKNKAVVSYDVD CCCHHEEHHCCHHHEEECCCCHHHHHHHCCHHHHHEEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA