Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is ypfL [H]

Identifier: 187933294

GI number: 187933294

Start: 2185704

End: 2186765

Strand: Reverse

Name: ypfL [H]

Synonym: CLL_A2088

Alternate gene names: 187933294

Gene position: 2186765-2185704 (Counterclockwise)

Preceding gene: 187934502

Following gene: 187932365

Centisome position: 57.54

GC content: 28.53

Gene sequence:

>1062_bases
ATGTATGAATGTCCTATATGTGGAAGAAAAAAATATGTTCAAGGTGTATGTCTAGATTGTCAGTCAAAATTGGAAAGAGA
AGCTTATGAATCATTGTCAGATGAAGAAATTAATATTCAAATTAAAGAAATAATTAATAATATTAAAGATGACGAGTATA
TTGATAAAGCTAAAAATATAATTAGCTATACAAATGTAGATACCTCTGAAATTGCAGAGGCTGCTTGTAATAATGAAATA
TATTATCCAAAGGAACTTTATAAAGATGCATCAGAAAAGGTTAGAGGTAAGCTTATTGAAAGATTAAAGAATACGGAACA
TTCATTAACTGCTAATAAATTATTAGAATGTCTTGCAATAATATGTGATGATGTTGTTTTAAATGCTTTCTATGAATTTG
AAAAGAATGCTCCAAAGTGGAGAGAAAAATTATATGTTAATCCATCGGTATATGCAGAAAGTGGAGGATGGACATTTGAT
GAAAACAAGAAAAAAATAAACTTAGCTTATGATGATTGCTATGTCATGTTTGAGGATAAAGAAATAAGTGATGAAGCTAT
TATTGTAGGAGCAATAAGTGATGAAAGATGTTCCGCATGTAATTCAAAGCTTGTAGATATTTTGTCTATTGATGGAAATG
ATGAAAGGTTAAAATTTATTAATTTAAAAGGAAAGATAAATATAAAGGTATGTTTAAATTGTCTTCCATATGAAGATGAG
TTCTGTAAATTTGATTTGGATGGTAGAAGTGAACTTATGCCATTTGAAGGCTATGAATGTGATGACGATGATGAAATAGA
AGAAGTGACTTCAAAGCATTTTACTTTATCAAAAGAGAAAGTAAGCAAGTATTATGGTTCTTTTAGTGAAGATCTAATCA
CAATAGGTGGAAGAGGAAACTTTGTTAATGACTGTATTCATTTAGAATGTCCATGCTGCAAGAATAAAATGAAATATTTA
GCTCAGATTCAGAGCAATTCAATTAATCTTTATGATGGAACAATGTATTTCTACATATGTGAAGATTGTAAGGTGGTTGG
AATTAATTATCAACAAACATAA

Upstream 100 bases:

>100_bases
AGTTAAGCATAATCTATATTTTCAAGTCTTAAATAATAAATATTTATATAGAATATGGTAAAATATATATGTTAATTATA
AAGATGGGTGGGAAATAGGA

Downstream 100 bases:

>100_bases
TTAATTATAAACTTGCACATAACTTTTATTATTTATGAAGAGGAGTCTATGTAATATAGGCTCTTATTTTTGTACTTAAA
TGTAATATTTATGGTGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF79 [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MYECPICGRKKYVQGVCLDCQSKLEREAYESLSDEEINIQIKEIINNIKDDEYIDKAKNIISYTNVDTSEIAEAACNNEI
YYPKELYKDASEKVRGKLIERLKNTEHSLTANKLLECLAIICDDVVLNAFYEFEKNAPKWREKLYVNPSVYAESGGWTFD
ENKKKINLAYDDCYVMFEDKEISDEAIIVGAISDERCSACNSKLVDILSIDGNDERLKFINLKGKINIKVCLNCLPYEDE
FCKFDLDGRSELMPFEGYECDDDDEIEEVTSKHFTLSKEKVSKYYGSFSEDLITIGGRGNFVNDCIHLECPCCKNKMKYL
AQIQSNSINLYDGTMYFYICEDCKVVGINYQQT

Sequences:

>Translated_353_residues
MYECPICGRKKYVQGVCLDCQSKLEREAYESLSDEEINIQIKEIINNIKDDEYIDKAKNIISYTNVDTSEIAEAACNNEI
YYPKELYKDASEKVRGKLIERLKNTEHSLTANKLLECLAIICDDVVLNAFYEFEKNAPKWREKLYVNPSVYAESGGWTFD
ENKKKINLAYDDCYVMFEDKEISDEAIIVGAISDERCSACNSKLVDILSIDGNDERLKFINLKGKINIKVCLNCLPYEDE
FCKFDLDGRSELMPFEGYECDDDDEIEEVTSKHFTLSKEKVSKYYGSFSEDLITIGGRGNFVNDCIHLECPCCKNKMKYL
AQIQSNSINLYDGTMYFYICEDCKVVGINYQQT
>Mature_353_residues
MYECPICGRKKYVQGVCLDCQSKLEREAYESLSDEEINIQIKEIINNIKDDEYIDKAKNIISYTNVDTSEIAEAACNNEI
YYPKELYKDASEKVRGKLIERLKNTEHSLTANKLLECLAIICDDVVLNAFYEFEKNAPKWREKLYVNPSVYAESGGWTFD
ENKKKINLAYDDCYVMFEDKEISDEAIIVGAISDERCSACNSKLVDILSIDGNDERLKFINLKGKINIKVCLNCLPYEDE
FCKFDLDGRSELMPFEGYECDDDDEIEEVTSKHFTLSKEKVSKYYGSFSEDLITIGGRGNFVNDCIHLECPCCKNKMKYL
AQIQSNSINLYDGTMYFYICEDCKVVGINYQQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40652; Mature: 40652

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYECPICGRKKYVQGVCLDCQSKLEREAYESLSDEEINIQIKEIINNIKDDEYIDKAKNI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCHHHHHHHHHH
ISYTNVDTSEIAEAACNNEIYYPKELYKDASEKVRGKLIERLKNTEHSLTANKLLECLAI
HEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ICDDVVLNAFYEFEKNAPKWREKLYVNPSVYAESGGWTFDENKKKINLAYDDCYVMFEDK
HHHHHHHHHHHHHCCCCCCHHHEEECCCCEEECCCCCEECCCCCEEEEEEEEEEEEEECC
EISDEAIIVGAISDERCSACNSKLVDILSIDGNDERLKFINLKGKINIKVCLNCLPYEDE
CCCCCEEEEEECCCHHHHHHCCCCEEEEEECCCCCEEEEEEECCEEEEEEEEEECCCCCC
FCKFDLDGRSELMPFEGYECDDDDEIEEVTSKHFTLSKEKVSKYYGSFSEDLITIGGRGN
CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCC
FVNDCIHLECPCCKNKMKYLAQIQSNSINLYDGTMYFYICEDCKVVGINYQQT
EECCEEEEECCHHHHHHHHHHHHHCCCEEEEECEEEEEEECCCEEEEEECCCC
>Mature Secondary Structure
MYECPICGRKKYVQGVCLDCQSKLEREAYESLSDEEINIQIKEIINNIKDDEYIDKAKNI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCHHHHHHHHHH
ISYTNVDTSEIAEAACNNEIYYPKELYKDASEKVRGKLIERLKNTEHSLTANKLLECLAI
HEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ICDDVVLNAFYEFEKNAPKWREKLYVNPSVYAESGGWTFDENKKKINLAYDDCYVMFEDK
HHHHHHHHHHHHHCCCCCCHHHEEECCCCEEECCCCCEECCCCCEEEEEEEEEEEEEECC
EISDEAIIVGAISDERCSACNSKLVDILSIDGNDERLKFINLKGKINIKVCLNCLPYEDE
CCCCCEEEEEECCCHHHHHHCCCCEEEEEECCCCCEEEEEEECCEEEEEEEEEECCCCCC
FCKFDLDGRSELMPFEGYECDDDDEIEEVTSKHFTLSKEKVSKYYGSFSEDLITIGGRGN
CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCC
FVNDCIHLECPCCKNKMKYLAQIQSNSINLYDGTMYFYICEDCKVVGINYQQT
EECCEEEEECCHHHHHHHHHHHHHCCCEEEEECEEEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10464203; 11677609 [H]