| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is yhbH [C]
Identifier: 187933289
GI number: 187933289
Start: 3197858
End: 3199033
Strand: Reverse
Name: yhbH [C]
Synonym: CLL_A3091
Alternate gene names: 187933289
Gene position: 3199033-3197858 (Counterclockwise)
Preceding gene: 187935417
Following gene: 187934462
Centisome position: 84.18
GC content: 29.93
Gene sequence:
>1176_bases ATGGCAATTTTTAGAGATAGAACTGATAAGCAAGTAGATCACGATAGAGCAATAGAAGATAAAAGAAGACATAGGCAATT AGTTGAAAAATCAATTAAGGAAAATTTAGGTGATATCTTATCTGAAGAGAGTATAGTTGGTCAAAGTAAAAATAAAAAAT TTAAAATACCTATAAAAAGTATTAAAGAATATCAATTTGTATATGGCAAAAATTCTAAAGGGGTAGCGACTGGAACTGGT GAAGAAAAACGTGGCGACAAAATAGAGTCAGGCTCTAAAAAAGCAATGGGAAAAGGGAATAAGGGTGCTGGTAATGAAGA AGGTGATGAAATTTATGAAACTGAAATTACCTTGGATGAACTTATGGAATATATATCCGATGAGCTTAATTTACCGAATT TAGATGAAAAGAAATATTCAGAAATAATAACTGACAGTTGTGGAAAGAAGAAAGGTTATCAAAGACATGGAATAAGGCCA AGACTTGCTAAAAAAAGGACAGTTATGGCTAAGATATCTAGAAAGCAAAGCAAAAAAAGGGCTCTAATAGAAGAAGGCAA AGATTATAAAACTGAAAGATTTCCATTTAGGGAAGAAGATCTTAGATATTACAAAGTTAAAATGCAGCCTAAAAAAGCAA GTAATGCAGTAATGATATTTATTATGGATGCTTCAGGATCTATGGATTCAACAAAGAAATATTTAGCAAGGTCATATTTC TTTGTATTATCTAGATTTTTAAAAAGAAAATACAACAATATAGCATTTGAATTTATATATCATACTACTATTGCTAAAAG AGTAAGTGAGTACGAGTTCTTTCATAAATCTGAATCAGGAGGTACGTATATATCAAGCGGTATAGTAGAGGCTATAAAAT TAATAGATGAAAAATATCCTCCAAGTGAATGGAATATATATCCTGTTTATGCTAGCGATGGTGATAACTGGTCTGAAGAT AATGTAAAAGCAATAGAATCAGTAAAGGAAATTTGTAAGATTAGCAATATGTTTGGATATGCAGAGCTGTTACCATCAAC TTATACTCAAACTATGTATTATAAATTTAATAAGGAGATAAATGAAAAGAATTTTATTTCTGTAGTTATTAAAGAGAAAA AGGATTTATGGGAAGCTTTAAAGACTATGCTTAAACAGGAATTAAAGGAGGATTAG
Upstream 100 bases:
>100_bases CTATGGTAGAGGAAATGAAACGAAATGGTTATTGTCTTCATTGTTGTGATGTAATATTAAAATATGCTGCTAACAACTTA TGGAAGGACTAATTTAGAAT
Downstream 100 bases:
>100_bases TAAAATGAGCTACACTTTAAGGGAGATTGAAGAATGGAACGATAAAATAGAGAAAAAAGTAATAGAATATGGATTAGACT TTTACAATCAAGAATTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MAIFRDRTDKQVDHDRAIEDKRRHRQLVEKSIKENLGDILSEESIVGQSKNKKFKIPIKSIKEYQFVYGKNSKGVATGTG EEKRGDKIESGSKKAMGKGNKGAGNEEGDEIYETEITLDELMEYISDELNLPNLDEKKYSEIITDSCGKKKGYQRHGIRP RLAKKRTVMAKISRKQSKKRALIEEGKDYKTERFPFREEDLRYYKVKMQPKKASNAVMIFIMDASGSMDSTKKYLARSYF FVLSRFLKRKYNNIAFEFIYHTTIAKRVSEYEFFHKSESGGTYISSGIVEAIKLIDEKYPPSEWNIYPVYASDGDNWSED NVKAIESVKEICKISNMFGYAELLPSTYTQTMYYKFNKEINEKNFISVVIKEKKDLWEALKTMLKQELKED
Sequences:
>Translated_391_residues MAIFRDRTDKQVDHDRAIEDKRRHRQLVEKSIKENLGDILSEESIVGQSKNKKFKIPIKSIKEYQFVYGKNSKGVATGTG EEKRGDKIESGSKKAMGKGNKGAGNEEGDEIYETEITLDELMEYISDELNLPNLDEKKYSEIITDSCGKKKGYQRHGIRP RLAKKRTVMAKISRKQSKKRALIEEGKDYKTERFPFREEDLRYYKVKMQPKKASNAVMIFIMDASGSMDSTKKYLARSYF FVLSRFLKRKYNNIAFEFIYHTTIAKRVSEYEFFHKSESGGTYISSGIVEAIKLIDEKYPPSEWNIYPVYASDGDNWSED NVKAIESVKEICKISNMFGYAELLPSTYTQTMYYKFNKEINEKNFISVVIKEKKDLWEALKTMLKQELKED >Mature_390_residues AIFRDRTDKQVDHDRAIEDKRRHRQLVEKSIKENLGDILSEESIVGQSKNKKFKIPIKSIKEYQFVYGKNSKGVATGTGE EKRGDKIESGSKKAMGKGNKGAGNEEGDEIYETEITLDELMEYISDELNLPNLDEKKYSEIITDSCGKKKGYQRHGIRPR LAKKRTVMAKISRKQSKKRALIEEGKDYKTERFPFREEDLRYYKVKMQPKKASNAVMIFIMDASGSMDSTKKYLARSYFF VLSRFLKRKYNNIAFEFIYHTTIAKRVSEYEFFHKSESGGTYISSGIVEAIKLIDEKYPPSEWNIYPVYASDGDNWSEDN VKAIESVKEICKISNMFGYAELLPSTYTQTMYYKFNKEINEKNFISVVIKEKKDLWEALKTMLKQELKED
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=411, Percent_Identity=25.7907542579075, Blast_Score=155, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014230 - InterPro: IPR006698 - InterPro: IPR002035 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 45499; Mature: 45368
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFRDRTDKQVDHDRAIEDKRRHRQLVEKSIKENLGDILSEESIVGQSKNKKFKIPIKS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHH IKEYQFVYGKNSKGVATGTGEEKRGDKIESGSKKAMGKGNKGAGNEEGDEIYETEITLDE HHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHEEHHCCHHH LMEYISDELNLPNLDEKKYSEIITDSCGKKKGYQRHGIRPRLAKKRTVMAKISRKQSKKR HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH ALIEEGKDYKTERFPFREEDLRYYKVKMQPKKASNAVMIFIMDASGSMDSTKKYLARSYF HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH FVLSRFLKRKYNNIAFEFIYHTTIAKRVSEYEFFHKSESGGTYISSGIVEAIKLIDEKYP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC PSEWNIYPVYASDGDNWSEDNVKAIESVKEICKISNMFGYAELLPSTYTQTMYYKFNKEI CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC NEKNFISVVIKEKKDLWEALKTMLKQELKED CCCHHEEHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIFRDRTDKQVDHDRAIEDKRRHRQLVEKSIKENLGDILSEESIVGQSKNKKFKIPIKS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHH IKEYQFVYGKNSKGVATGTGEEKRGDKIESGSKKAMGKGNKGAGNEEGDEIYETEITLDE HHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHEEHHCCHHH LMEYISDELNLPNLDEKKYSEIITDSCGKKKGYQRHGIRPRLAKKRTVMAKISRKQSKKR HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH ALIEEGKDYKTERFPFREEDLRYYKVKMQPKKASNAVMIFIMDASGSMDSTKKYLARSYF HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH FVLSRFLKRKYNNIAFEFIYHTTIAKRVSEYEFFHKSESGGTYISSGIVEAIKLIDEKYP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC PSEWNIYPVYASDGDNWSEDNVKAIESVKEICKISNMFGYAELLPSTYTQTMYYKFNKEI CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC NEKNFISVVIKEKKDLWEALKTMLKQELKED CCCHHEEHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA