| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is yecA [C]
Identifier: 187933139
GI number: 187933139
Start: 3758443
End: 3758940
Strand: Reverse
Name: yecA [C]
Synonym: CLL_A3550
Alternate gene names: 187933139
Gene position: 3758940-3758443 (Counterclockwise)
Preceding gene: 187935301
Following gene: 187933905
Centisome position: 98.91
GC content: 26.71
Gene sequence:
>498_bases GTGAGTTTATATACAGATTGGACTAATATGGTTGTAGACTATGTAAAAACTAAGGGAGAAAATGCTTTCTGGCAAGAATA TAGTAAGTTAGAAAAAAGCATTTATAAAGATTTATTAGCAAAACACAAGGAACCTAAGAAGACAACAATTGCTGGTTTAG CAAAGGAATATGATTCTTCATTAGAATTTATAATGGGATTCATTGATGGAATAAATGATAGTTTAAGAAATCAATATGAT TTAGAAAATTTAGATGAAAATACTGAATTAGTATTAGATATTGATTTAGAAAATTTATATTATAATATGTTAGATGCAAA AGCTGAATATCTTTACACTTTACCACAATGGGATGGAATATTCTCAGAAGAAAAGAGAAAAGAAATTCAAAAACAATTTA GAGATTCTAAAATCATTAGAAATAATGAAAAAGTTGGAAGAAATGATGATTGTCCATGTGGAAGCGGAAAGAAATATAAA AAGTGTTGTGGTAAATAG
Upstream 100 bases:
>100_bases ATAGACATGAACCGAGTGAATTTATAGAATTTTAAATTGGTTACTATGAAATAAATTTATAAATATAAAACAAAAGCAAC ATTAAGGGAGGATTTTAAAA
Downstream 100 bases:
>100_bases TTTTCTAATAAGGGATCTACAACGATCCCTTTTATTTATATATAGAAATTTTTATGAACAACCATTGAAAAAATATATAA GAATTTAAACTCATAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: SEC-C Domain-Containing Protein Domain-Containing Protein; SEC-C Domain Protein; Sec-C Motif Domain Protein; SEC-C Motif Domain-Containing Protein; Preprotein Translocase SecA Subunit; SEC-C Domain-Containing Protein
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSLYTDWTNMVVDYVKTKGENAFWQEYSKLEKSIYKDLLAKHKEPKKTTIAGLAKEYDSSLEFIMGFIDGINDSLRNQYD LENLDENTELVLDIDLENLYYNMLDAKAEYLYTLPQWDGIFSEEKRKEIQKQFRDSKIIRNNEKVGRNDDCPCGSGKKYK KCCGK
Sequences:
>Translated_165_residues MSLYTDWTNMVVDYVKTKGENAFWQEYSKLEKSIYKDLLAKHKEPKKTTIAGLAKEYDSSLEFIMGFIDGINDSLRNQYD LENLDENTELVLDIDLENLYYNMLDAKAEYLYTLPQWDGIFSEEKRKEIQKQFRDSKIIRNNEKVGRNDDCPCGSGKKYK KCCGK >Mature_164_residues SLYTDWTNMVVDYVKTKGENAFWQEYSKLEKSIYKDLLAKHKEPKKTTIAGLAKEYDSSLEFIMGFIDGINDSLRNQYDL ENLDENTELVLDIDLENLYYNMLDAKAEYLYTLPQWDGIFSEEKRKEIQKQFRDSKIIRNNEKVGRNDDCPCGSGKKYKK CCGK
Specific function: Unknown
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19374; Mature: 19243
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYTDWTNMVVDYVKTKGENAFWQEYSKLEKSIYKDLLAKHKEPKKTTIAGLAKEYDSS CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LEFIMGFIDGINDSLRNQYDLENLDENTELVLDIDLENLYYNMLDAKAEYLYTLPQWDGI HHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHEEECCCCCCC FSEEKRKEIQKQFRDSKIIRNNEKVGRNDDCPCGSGKKYKKCCGK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure SLYTDWTNMVVDYVKTKGENAFWQEYSKLEKSIYKDLLAKHKEPKKTTIAGLAKEYDSS CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LEFIMGFIDGINDSLRNQYDLENLDENTELVLDIDLENLYYNMLDAKAEYLYTLPQWDGI HHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHEEECCCCCCC FSEEKRKEIQKQFRDSKIIRNNEKVGRNDDCPCGSGKKYKKCCGK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA