Click here to switch to the map view.

The map label for this gene is 187933086

Identifier: 187933086

GI number: 187933086

Start: 3109560

End: 3110279

Strand: Reverse

Name: 187933086

Synonym: CLL_A3011

Alternate gene names: NA

Gene position: 3110279-3109560 (Counterclockwise)

Preceding gene: 187933635

Following gene: 187934905

Centisome position: 81.84

GC content: 31.67

Gene sequence:

>720_bases
TTGAGTAGATTATTTAAATATGAGCTTAAGCGATTGCTTTTAAATAAATTTTTCCTAGGACTATTAATTATTTCTGCTTT
GTATAGTCATCAGATAATGTGTGGAGATATTATCCTTGGGGTTGCAAATACTGCGCCATTTTCTGGCTGGAGCTATGGAG
CATACCTTGCTAAAATGTTACCAATTTTGCTTGTTGCTTTACTCTTTTTTATATCTTTTCTTTATTCAAAACAAGAAAAG
AATGTACAAGCTTTAACTAAAGCAACTCCTATTAATCCATTTAGGTTTCAAATGTTACGTTATGGAACTATTATCATAGC
TTTTGTTTTAATTTCTCTTGTTCCAATTGTATATAGTTTGTGGTTCTACGGAGTGAATTTTCATTTCATAAACTTTGGAA
GCCTTGTGTTTCCAAGTATTATTACACTACTGCCAGCCATGTTATTTGTACTTGGTTTGGGAGCTTTTGGTGGACGATAC
CATCAAGCAGTAGTTTTTGTACTTATGGTAGTTATGATACTGATTAACTATATTCCATTACCATATGCAGTTGATTTATT
TGGAGGAAATTTCTATTCAAACTATCCAGCATCTTTAGACATAGTAGAGCCAACTTTCTTATTACCAACAACTATACTAA
TTGGAAAACTTATATATGGCCTAGCTGGAGTTGTGATGATATTGATAGCGAGTATTTCAAAGAAGCAAAATAATTATTAA

Upstream 100 bases:

>100_bases
GATAAAATTCTAGCCAAACTATATGAGAAGAGTGAAGAAACAAAAATTACATGGCAAGACTTTTTAGATGCTTGCGGACT
TAAAGAGGAGGATTTAAACA

Downstream 100 bases:

>100_bases
TATTTAGAATAATTTAAAGGCTACTTATATAGAGTGAGCCTTTAAATTTTATTTAAATTAAATTATTTTTTAATCGTATC
TTTCTATTATTATAATGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSRLFKYELKRLLLNKFFLGLLIISALYSHQIMCGDIILGVANTAPFSGWSYGAYLAKMLPILLVALLFFISFLYSKQEK
NVQALTKATPINPFRFQMLRYGTIIIAFVLISLVPIVYSLWFYGVNFHFINFGSLVFPSIITLLPAMLFVLGLGAFGGRY
HQAVVFVLMVVMILINYIPLPYAVDLFGGNFYSNYPASLDIVEPTFLLPTTILIGKLIYGLAGVVMILIASISKKQNNY

Sequences:

>Translated_239_residues
MSRLFKYELKRLLLNKFFLGLLIISALYSHQIMCGDIILGVANTAPFSGWSYGAYLAKMLPILLVALLFFISFLYSKQEK
NVQALTKATPINPFRFQMLRYGTIIIAFVLISLVPIVYSLWFYGVNFHFINFGSLVFPSIITLLPAMLFVLGLGAFGGRY
HQAVVFVLMVVMILINYIPLPYAVDLFGGNFYSNYPASLDIVEPTFLLPTTILIGKLIYGLAGVVMILIASISKKQNNY
>Mature_238_residues
SRLFKYELKRLLLNKFFLGLLIISALYSHQIMCGDIILGVANTAPFSGWSYGAYLAKMLPILLVALLFFISFLYSKQEKN
VQALTKATPINPFRFQMLRYGTIIIAFVLISLVPIVYSLWFYGVNFHFINFGSLVFPSIITLLPAMLFVLGLGAFGGRYH
QAVVFVLMVVMILINYIPLPYAVDLFGGNFYSNYPASLDIVEPTFLLPTTILIGKLIYGLAGVVMILIASISKKQNNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26840; Mature: 26709

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLFKYELKRLLLNKFFLGLLIISALYSHQIMCGDIILGVANTAPFSGWSYGAYLAKML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
PILLVALLFFISFLYSKQEKNVQALTKATPINPFRFQMLRYGTIIIAFVLISLVPIVYSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFYGVNFHFINFGSLVFPSIITLLPAMLFVLGLGAFGGRYHQAVVFVLMVVMILINYIPL
HHHCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PYAVDLFGGNFYSNYPASLDIVEPTFLLPTTILIGKLIYGLAGVVMILIASISKKQNNY
CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRLFKYELKRLLLNKFFLGLLIISALYSHQIMCGDIILGVANTAPFSGWSYGAYLAKML
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
PILLVALLFFISFLYSKQEKNVQALTKATPINPFRFQMLRYGTIIIAFVLISLVPIVYSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFYGVNFHFINFGSLVFPSIITLLPAMLFVLGLGAFGGRYHQAVVFVLMVVMILINYIPL
HHHCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PYAVDLFGGNFYSNYPASLDIVEPTFLLPTTILIGKLIYGLAGVVMILIASISKKQNNY
CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA