Click here to switch to the map view.

The map label for this gene is 187932970

Identifier: 187932970

GI number: 187932970

Start: 2849247

End: 2849549

Strand: Reverse

Name: 187932970

Synonym: CLL_A2748

Alternate gene names: NA

Gene position: 2849549-2849247 (Counterclockwise)

Preceding gene: 187935101

Following gene: 187933208

Centisome position: 74.98

GC content: 30.36

Gene sequence:

>303_bases
ATGACAAATATGATTGGAAATTTAATTAAGAATAATGCAGATATAGATGATAAAATGATAGCAATGAGCATGTTATCAGC
AGCAAAAGAATCAGCAGATATGTATCTTAATTCAGCATTAACAAGTAGTACCCCTGAGTTAAGAGCAGTTTATTCTGCAT
CACTAGTACAAATGGTTGAAGGACACACATCTCTTACAGAATTGAGTGTTAATAAAGGATGGATTAAACCATATAGTACG
CCTACTGAACAATTATCATGTTCTTATAATGAATCAAAAAATGCTATTAATGAAAACAAGTAA

Upstream 100 bases:

>100_bases
CAATCAGAAGCTAGTATTTTAGCAACAGAAGGTAGAATTAAAGGAATACAACAATTTATAAGTGAAAATAATGTGTCAGT
TGCTAAGGAGGGATAGAAGT

Downstream 100 bases:

>100_bases
AAATTAGGTTAAAACTTATAAGGAACTCTAGTAATAGGGTTCTTTTTTTTACGCAATAAAACAGAAAGAGGTGAGAACAA
TGGAAGTAAAATGCTACACA

Product: spore coat protein

Products: NA

Alternate protein names: Coat F Domain-Containing Protein; Coat F Domain Protein; Spore Coat Protein F Family Protein; Spore Coat Protein-Like Protein; Spore Coat Protein F

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTNMIGNLIKNNADIDDKMIAMSMLSAAKESADMYLNSALTSSTPELRAVYSASLVQMVEGHTSLTELSVNKGWIKPYST
PTEQLSCSYNESKNAINENK

Sequences:

>Translated_100_residues
MTNMIGNLIKNNADIDDKMIAMSMLSAAKESADMYLNSALTSSTPELRAVYSASLVQMVEGHTSLTELSVNKGWIKPYST
PTEQLSCSYNESKNAINENK
>Mature_99_residues
TNMIGNLIKNNADIDDKMIAMSMLSAAKESADMYLNSALTSSTPELRAVYSASLVQMVEGHTSLTELSVNKGWIKPYSTP
TEQLSCSYNESKNAINENK

Specific function: Unknown

COG id: COG5577

COG function: function code M; Spore coat protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10954; Mature: 10822

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNMIGNLIKNNADIDDKMIAMSMLSAAKESADMYLNSALTSSTPELRAVYSASLVQMVE
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GHTSLTELSVNKGWIKPYSTPTEQLSCSYNESKNAINENK
CCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNMIGNLIKNNADIDDKMIAMSMLSAAKESADMYLNSALTSSTPELRAVYSASLVQMVE
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GHTSLTELSVNKGWIKPYSTPTEQLSCSYNESKNAINENK
CCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA