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The map label for this gene is ykpA [H]

Identifier: 187932894

GI number: 187932894

Start: 53133

End: 54728

Strand: Reverse

Name: ykpA [H]

Synonym: CLL_A0054

Alternate gene names: 187932894

Gene position: 54728-53133 (Counterclockwise)

Preceding gene: 187934459

Following gene: 187932700

Centisome position: 1.44

GC content: 31.08

Gene sequence:

>1596_bases
TTGATAACTGTATCAAATGTTAGTCTTAGATTTGGTGGACGTAAACTTTTTGAAGACGTAAACCTTAAATTTACAGCAGG
AAATTGTTATGGAGTTATTGGCGCAAATGGTGCTGGAAAAAGTACTTTTCTTAAAATACTTTCAGGTGAAGTTGAACCTA
ATACTGGTGACGTTATAATTGCTCCAAATACAAGAATGTCAGTATTAACACAAGATCATTACAAATATGATGATTGTCAA
GTTTTAGAAACTGTTATAATGGGTAATGAAAGATTATACCAAATAATGAAGGAAAAAGATGAGTTATATGCAAAGCCTGA
TTTTTCTGATGAAGATGGAATTAAAGCATCTGAATTAGAAGGAGAATTTGCTGAACTTAATGGTTGGGAAGCAGAATCTG
AAGCTTCTTCACTTTTACAAGGTTTAGGAATTGGCACTGATTATCACTTTAAAAATGTGTCAGAATTAACTGGAGGAGAA
AAGGTTAAAGTTCTTTTAGCTCAAGCTCTATTCGGTAATCCTGGAATACTAATACTAGACGAACCTACTAATGGTCTTGA
TTTAAAGGCTGTTAATTGGTTAGAAGATTTCTTAGGTAATTTTGATGGAACTGTTATAGTTGTATCACATGATAGACATT
TCTTAAACTCAGTTTGTACTCAAATGGCTGATGTTGATTTTGGAAAGATTAAGATTTATGTTGGTAACTATGATTTCTGG
TATGAATCAAGCCAATTAGCCCTTCAAATGTCTAAGGATCAAAATAAGAAAAAAGAAGAAAAAATTAAAGAATTACAAGA
CTTCGTTGCAAGATTTAGTGCTAATGCATCTAAATCTAAGCAAGCTACTTCTCGTAAGAAATTATTAGATAAAATCACTT
TAGATGACATCCAACCTTCAAGCAGAAAATATCCTTTCGTAGGATTTACACCTGAAAGAGAAGTTGGTAATGACATATTA
ACAGTTAAAGATTTATCTAAAACTGTAGATGGAGTTAAGCTTTTAGATAACATTAATTTCATGGTGAATAAAGGTGATAA
AATTGCTCTTATCGGTAATGAAATTGCTGTAACTGCATTATTCAAAATACTAGCTGGAGAAATGGAACCAGATAGTGGAG
AATACAAATGGGGAATAACTATAACTAATTCTTACTTCCCAACTGATAATTCTCAATATTTTGATGGATGTAATCTGTCT
TTAGTTGATTGGCTTAGACAATATTCTGAGGAAAAATCTGAAAGCTACATAAGAGGTTTCTTAGGAAGAATGTTATTCTC
TGGGGAAGAAGCTCTAAAGGAAGCTAATGTATTATCTGGAGGAGAAAAGGTTAGATGTATGTTATCTAGAATGATGCTTT
CTAACGGAAATGTATTAATGTTAGATCAACCTACTAATCACCTTGATCTTGAATCAATTACTGCTGTAAATAATGGTTTA
AAAAATTATAACAGTAATATAATATTTGCTTCTCATGACCATCAATTTGTTCAAACTATAGCAAATAGAATTATAGATAT
TAAAGATGATGGTTCTATTGTTGATAGAACTATGACATTTGATGAATATTTAGAATTCGCTGCAACTAGTAAATAA

Upstream 100 bases:

>100_bases
TCAATAATAAAGATGCTTTTAATTCCTTTAAATATTCTCTTTATGTAGTTTTATGTGGTATAATAACGAAATGAATATTC
AATGAAATGAGGGAAATTTA

Downstream 100 bases:

>100_bases
TTAGGCTAAAAGGCTATTTCACTAAGGAATAGCCTTTATTTTGATTTAATCAATTACTTATATAATAACTCTTCTATAAC
TTCATATACATAATCAACTT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MITVSNVSLRFGGRKLFEDVNLKFTAGNCYGVIGANGAGKSTFLKILSGEVEPNTGDVIIAPNTRMSVLTQDHYKYDDCQ
VLETVIMGNERLYQIMKEKDELYAKPDFSDEDGIKASELEGEFAELNGWEAESEASSLLQGLGIGTDYHFKNVSELTGGE
KVKVLLAQALFGNPGILILDEPTNGLDLKAVNWLEDFLGNFDGTVIVVSHDRHFLNSVCTQMADVDFGKIKIYVGNYDFW
YESSQLALQMSKDQNKKKEEKIKELQDFVARFSANASKSKQATSRKKLLDKITLDDIQPSSRKYPFVGFTPEREVGNDIL
TVKDLSKTVDGVKLLDNINFMVNKGDKIALIGNEIAVTALFKILAGEMEPDSGEYKWGITITNSYFPTDNSQYFDGCNLS
LVDWLRQYSEEKSESYIRGFLGRMLFSGEEALKEANVLSGGEKVRCMLSRMMLSNGNVLMLDQPTNHLDLESITAVNNGL
KNYNSNIIFASHDHQFVQTIANRIIDIKDDGSIVDRTMTFDEYLEFAATSK

Sequences:

>Translated_531_residues
MITVSNVSLRFGGRKLFEDVNLKFTAGNCYGVIGANGAGKSTFLKILSGEVEPNTGDVIIAPNTRMSVLTQDHYKYDDCQ
VLETVIMGNERLYQIMKEKDELYAKPDFSDEDGIKASELEGEFAELNGWEAESEASSLLQGLGIGTDYHFKNVSELTGGE
KVKVLLAQALFGNPGILILDEPTNGLDLKAVNWLEDFLGNFDGTVIVVSHDRHFLNSVCTQMADVDFGKIKIYVGNYDFW
YESSQLALQMSKDQNKKKEEKIKELQDFVARFSANASKSKQATSRKKLLDKITLDDIQPSSRKYPFVGFTPEREVGNDIL
TVKDLSKTVDGVKLLDNINFMVNKGDKIALIGNEIAVTALFKILAGEMEPDSGEYKWGITITNSYFPTDNSQYFDGCNLS
LVDWLRQYSEEKSESYIRGFLGRMLFSGEEALKEANVLSGGEKVRCMLSRMMLSNGNVLMLDQPTNHLDLESITAVNNGL
KNYNSNIIFASHDHQFVQTIANRIIDIKDDGSIVDRTMTFDEYLEFAATSK
>Mature_531_residues
MITVSNVSLRFGGRKLFEDVNLKFTAGNCYGVIGANGAGKSTFLKILSGEVEPNTGDVIIAPNTRMSVLTQDHYKYDDCQ
VLETVIMGNERLYQIMKEKDELYAKPDFSDEDGIKASELEGEFAELNGWEAESEASSLLQGLGIGTDYHFKNVSELTGGE
KVKVLLAQALFGNPGILILDEPTNGLDLKAVNWLEDFLGNFDGTVIVVSHDRHFLNSVCTQMADVDFGKIKIYVGNYDFW
YESSQLALQMSKDQNKKKEEKIKELQDFVARFSANASKSKQATSRKKLLDKITLDDIQPSSRKYPFVGFTPEREVGNDIL
TVKDLSKTVDGVKLLDNINFMVNKGDKIALIGNEIAVTALFKILAGEMEPDSGEYKWGITITNSYFPTDNSQYFDGCNLS
LVDWLRQYSEEKSESYIRGFLGRMLFSGEEALKEANVLSGGEKVRCMLSRMMLSNGNVLMLDQPTNHLDLESITAVNNGL
KNYNSNIIFASHDHQFVQTIANRIIDIKDDGSIVDRTMTFDEYLEFAATSK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=535, Percent_Identity=28.9719626168224, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI10947137, Length=514, Percent_Identity=30.5447470817121, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI27881506, Length=514, Percent_Identity=30.5447470817121, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI69354671, Length=557, Percent_Identity=26.3913824057451, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI10947135, Length=557, Percent_Identity=26.3913824057451, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI105990541, Length=204, Percent_Identity=27.9411764705882, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI21536376, Length=209, Percent_Identity=27.7511961722488, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=25.6198347107438, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=25.6198347107438, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI255708477, Length=212, Percent_Identity=29.2452830188679, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI1787041, Length=526, Percent_Identity=44.2965779467681, Blast_Score=494, Evalue=1e-141,
Organism=Escherichia coli, GI1789751, Length=513, Percent_Identity=31.1890838206628, Blast_Score=262, Evalue=5e-71,
Organism=Escherichia coli, GI2367384, Length=525, Percent_Identity=29.9047619047619, Blast_Score=235, Evalue=5e-63,
Organism=Escherichia coli, GI1787182, Length=504, Percent_Identity=28.7698412698413, Blast_Score=218, Evalue=6e-58,
Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=28.5106382978723, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI87081834, Length=215, Percent_Identity=28.3720930232558, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1789864, Length=232, Percent_Identity=22.8448275862069, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1786319, Length=232, Percent_Identity=22.4137931034483, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87081709, Length=215, Percent_Identity=25.1162790697674, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790525, Length=533, Percent_Identity=22.7016885553471, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788210, Length=203, Percent_Identity=31.0344827586207, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=519, Percent_Identity=30.2504816955684, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17555318, Length=511, Percent_Identity=26.2230919765166, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17559834, Length=512, Percent_Identity=25.78125, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17510237, Length=224, Percent_Identity=23.6607142857143, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=32.5800376647834, Blast_Score=247, Evalue=3e-66,
Organism=Saccharomyces cerevisiae, GI6321121, Length=518, Percent_Identity=28.5714285714286, Blast_Score=215, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6325030, Length=237, Percent_Identity=29.957805907173, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6323278, Length=369, Percent_Identity=26.2872628726287, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6324314, Length=374, Percent_Identity=24.5989304812834, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24666836, Length=512, Percent_Identity=28.3203125, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24642252, Length=516, Percent_Identity=26.5503875968992, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI18859989, Length=516, Percent_Identity=26.5503875968992, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=28.7037037037037, Blast_Score=208, Evalue=9e-54,
Organism=Drosophila melanogaster, GI116007184, Length=190, Percent_Identity=27.8947368421053, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221500365, Length=190, Percent_Identity=27.8947368421053, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59314; Mature: 59314

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVSNVSLRFGGRKLFEDVNLKFTAGNCYGVIGANGAGKSTFLKILSGEVEPNTGDVII
CEEEEEEEEEECCHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
APNTRMSVLTQDHYKYDDCQVLETVIMGNERLYQIMKEKDELYAKPDFSDEDGIKASELE
CCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCCCCHHHCC
GEFAELNGWEAESEASSLLQGLGIGTDYHFKNVSELTGGEKVKVLLAQALFGNPGILILD
CCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEEEE
EPTNGLDLKAVNWLEDFLGNFDGTVIVVSHDRHFLNSVCTQMADVDFGKIKIYVGNYDFW
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALQMSKDQNKKKEEKIKELQDFVARFSANASKSKQATSRKKLLDKITLDDIQPS
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SRKYPFVGFTPEREVGNDILTVKDLSKTVDGVKLLDNINFMVNKGDKIALIGNEIAVTAL
CCCCCEECCCCCHHHCCCEEEHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCHHHHHHH
FKILAGEMEPDSGEYKWGITITNSYFPTDNSQYFDGCNLSLVDWLRQYSEEKSESYIRGF
HHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGRMLFSGEEALKEANVLSGGEKVRCMLSRMMLSNGNVLMLDQPTNHLDLESITAVNNGL
HHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
KNYNSNIIFASHDHQFVQTIANRIIDIKDDGSIVDRTMTFDEYLEFAATSK
HHCCCCEEEEECCHHHHHHHHHHEEEECCCCCEEEHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MITVSNVSLRFGGRKLFEDVNLKFTAGNCYGVIGANGAGKSTFLKILSGEVEPNTGDVII
CEEEEEEEEEECCHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
APNTRMSVLTQDHYKYDDCQVLETVIMGNERLYQIMKEKDELYAKPDFSDEDGIKASELE
CCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCCCCHHHCC
GEFAELNGWEAESEASSLLQGLGIGTDYHFKNVSELTGGEKVKVLLAQALFGNPGILILD
CCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEEEE
EPTNGLDLKAVNWLEDFLGNFDGTVIVVSHDRHFLNSVCTQMADVDFGKIKIYVGNYDFW
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALQMSKDQNKKKEEKIKELQDFVARFSANASKSKQATSRKKLLDKITLDDIQPS
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SRKYPFVGFTPEREVGNDILTVKDLSKTVDGVKLLDNINFMVNKGDKIALIGNEIAVTAL
CCCCCEECCCCCHHHCCCEEEHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCHHHHHHH
FKILAGEMEPDSGEYKWGITITNSYFPTDNSQYFDGCNLSLVDWLRQYSEEKSESYIRGF
HHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGRMLFSGEEALKEANVLSGGEKVRCMLSRMMLSNGNVLMLDQPTNHLDLESITAVNNGL
HHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
KNYNSNIIFASHDHQFVQTIANRIIDIKDDGSIVDRTMTFDEYLEFAATSK
HHCCCCEEEEECCHHHHHHHHHHEEEECCCCCEEEHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]