| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932845
Identifier: 187932845
GI number: 187932845
Start: 223125
End: 223523
Strand: Reverse
Name: 187932845
Synonym: CLL_A0214
Alternate gene names: NA
Gene position: 223523-223125 (Counterclockwise)
Preceding gene: 187933956
Following gene: 187934222
Centisome position: 5.88
GC content: 26.32
Gene sequence:
>399_bases ATGAAAGATATAATATTTGATGATTTTCAAAACTCTGTAAATGATTCTTTGTTAAGACATAAAAGTATCTTAGATATACT TACTAAATATAGTGAATCTAGTTCTAGAGTTAATAGGGCAGTTGCAAAATCTGTTACAAATTGCGGATGCATAAATATTA ATGCTTCTAAACAAAATTCATTAAATGAAGATAAATCTGTTGACGACTTATCTACCTACTTAGAATCTCACTTAAGTGGT GAACTTTGTGAAAATTGTCGTGAAATCATAGAAAAAGAGATTGGTAATAATCTTTTTTATCTTACTTCTTTGTGCAATAA TCTAGATATAAATTTATATGATGTTTTGCTTAAAGAGCACGACAAAATAAATACACTTGGAAAATTTGCTTTTAGATAA
Upstream 100 bases:
>100_bases ATACATGTATTCCAAATCTTAATCCCATATTAGTAAAATAGTCTGAAAATATTTATAATTACTTAAAGTAAAATTAAATT ATCTCAAGGAGTTGAGGCGT
Downstream 100 bases:
>100_bases TAAAAAATCGGTTTACCTTTTGTGGTAATACCGATTTTCTACTTTTATATCTTTTTATTTAAAAGAATTTGTTCCCTTAT TCTTTTTAACCCATCTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKDIIFDDFQNSVNDSLLRHKSILDILTKYSESSSRVNRAVAKSVTNCGCININASKQNSLNEDKSVDDLSTYLESHLSG ELCENCREIIEKEIGNNLFYLTSLCNNLDINLYDVLLKEHDKINTLGKFAFR
Sequences:
>Translated_132_residues MKDIIFDDFQNSVNDSLLRHKSILDILTKYSESSSRVNRAVAKSVTNCGCININASKQNSLNEDKSVDDLSTYLESHLSG ELCENCREIIEKEIGNNLFYLTSLCNNLDINLYDVLLKEHDKINTLGKFAFR >Mature_132_residues MKDIIFDDFQNSVNDSLLRHKSILDILTKYSESSSRVNRAVAKSVTNCGCININASKQNSLNEDKSVDDLSTYLESHLSG ELCENCREIIEKEIGNNLFYLTSLCNNLDINLYDVLLKEHDKINTLGKFAFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15011; Mature: 15011
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIIFDDFQNSVNDSLLRHKSILDILTKYSESSSRVNRAVAKSVTNCGCININASKQNS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCCCC LNEDKSVDDLSTYLESHLSGELCENCREIIEKEIGNNLFYLTSLCNNLDINLYDVLLKEH CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEHHHHHHCCCCCHHHHHHHHHH DKINTLGKFAFR HHHHHHHHHHCC >Mature Secondary Structure MKDIIFDDFQNSVNDSLLRHKSILDILTKYSESSSRVNRAVAKSVTNCGCININASKQNS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCCCC LNEDKSVDDLSTYLESHLSGELCENCREIIEKEIGNNLFYLTSLCNNLDINLYDVLLKEH CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEHHHHHHCCCCCHHHHHHHHHH DKINTLGKFAFR HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA