| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187932813
Identifier: 187932813
GI number: 187932813
Start: 93643
End: 93852
Strand: Reverse
Name: 187932813
Synonym: CLL_A0086
Alternate gene names: NA
Gene position: 93852-93643 (Counterclockwise)
Preceding gene: 187932348
Following gene: 187933779
Centisome position: 2.47
GC content: 29.52
Gene sequence:
>210_bases ATGGATAACAATTTAAACAAAGATATTTTAGATAAAATAACAAAGACTTGCACTTGTAAAAGTATAACTAGGGCAAAAAT TAAAGAAGCTATAGTAAATGGTGCCTCAACTTACGAAGAAGTTCAAAAAGCAACCGGTGCAGGATCAGGATGCTGCAAAG GAAAAAAGTGTTCAGAAAAAATAAATGATTTAATAAAAGAACTAAACTAA
Upstream 100 bases:
>100_bases AATATAATGGATAATAATTATTATTTAATATTGACTCATTTAAATTAAGGTGTTTTAATTTAATAAATAAGAATTTAAAG CATATAAGGAGAAAATATAT
Downstream 100 bases:
>100_bases TTTACTATGTTTAAATATCTGCTGATATATGCAATAGGTAAAATGGCATTGTAATTGGACTTTGAGAATTCTTAATGAGT ATTGTCATATTTATTGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MDNNLNKDILDKITKTCTCKSITRAKIKEAIVNGASTYEEVQKATGAGSGCCKGKKCSEKINDLIKELN
Sequences:
>Translated_69_residues MDNNLNKDILDKITKTCTCKSITRAKIKEAIVNGASTYEEVQKATGAGSGCCKGKKCSEKINDLIKELN >Mature_69_residues MDNNLNKDILDKITKTCTCKSITRAKIKEAIVNGASTYEEVQKATGAGSGCCKGKKCSEKINDLIKELN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7480; Mature: 7480
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 7.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNLNKDILDKITKTCTCKSITRAKIKEAIVNGASTYEEVQKATGAGSGCCKGKKCSEK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHH INDLIKELN HHHHHHHCC >Mature Secondary Structure MDNNLNKDILDKITKTCTCKSITRAKIKEAIVNGASTYEEVQKATGAGSGCCKGKKCSEK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHH INDLIKELN HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA