| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932763
Identifier: 187932763
GI number: 187932763
Start: 2154249
End: 2155166
Strand: Reverse
Name: 187932763
Synonym: CLL_A2059
Alternate gene names: NA
Gene position: 2155166-2154249 (Counterclockwise)
Preceding gene: 187935729
Following gene: 187933726
Centisome position: 56.71
GC content: 29.74
Gene sequence:
>918_bases ATGAAAGATATGAAAACTTGTGAAATATTATTAGCGGAATATTTAAAGTCAGAATCTAAAATATATGGTGTAGAAAAAAT AAACTTTATTAATGTAGGTGAAAATGATGTATATAATATATCAGCTCCATTTGTAGATAATGATAAGACAATTATTGCTG GTAGAGTTGAGGCTAGAGATAGTGAACATTCAACAGTATATTTCTTTGAAAAAAATGATGAGGGATGGTCACCAATTGAT TCATATCCGACATTTTCACTTCAAGATCCCTTTTTTACAAAAATAAATAATGAATTAATCGTTGGAGGAGTTGAAATATT TCCGCATCCAGAAATAGAAGGAACTTTAAAATGGAGAACTATATTTTATAAAGGAAAGGATGTAGCTTCATTAGAAAGAT TCTTTGTAGGTCCAGATGGAATGAAAGATTTAAGATTAGTTCAATTATTAGATAAGAGAATAGGAGTTTTAACTAGACCA CAAGGTGAGAAGGGTGGTAGAGGTAGAATAGGATTTTCAATAATAAATACATTAGAAGAATTAAATATAAAAGTTATAGA GGAATCTCCATTATTAGATGGATTATTTGTAGATGAAGAATGGGGTGGAGCTAATGAGGCTAGACCTTTAAATGAGACAA CCTTAGGAATATTAGGACATGTAGCTTGTTTTGATAAAGATGGAAATAGACACTACTACCCAATGACATTTGAGTTAAAC ATAAATACATTAGAAGTGAAAAATCAGAAGTTAATAGCTGTAAGAAAAGATTTTAAACCTGGCCAAGCTAAAAGACCAGA TTTAGAAGATGTTGTATTTAGTGGAGGATTAGAAATAAAAGAAGATAAAGCAACATTATATGCAGGGATAAGTGATGCTG AAGCTCAATTTATAATAATTGACAATCCATTTAAATAG
Upstream 100 bases:
>100_bases AATGAAGATATAGTAATGGGTGTTGATATTGTTGAAAGAGATTCAGTTGGAATAAAAAATATTATGGAGAATGAACAAAA GAATTAATAAAGAGAGCGAG
Downstream 100 bases:
>100_bases AGGAGGTAAAAGCTATGCACAAAAAATGGTGGAAAGAAAGTGTATTTTATGAAATATACATGCCAAGCTTTAAAGATGGA AACAATGATGGCATAGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKDMKTCEILLAEYLKSESKIYGVEKINFINVGENDVYNISAPFVDNDKTIIAGRVEARDSEHSTVYFFEKNDEGWSPID SYPTFSLQDPFFTKINNELIVGGVEIFPHPEIEGTLKWRTIFYKGKDVASLERFFVGPDGMKDLRLVQLLDKRIGVLTRP QGEKGGRGRIGFSIINTLEELNIKVIEESPLLDGLFVDEEWGGANEARPLNETTLGILGHVACFDKDGNRHYYPMTFELN INTLEVKNQKLIAVRKDFKPGQAKRPDLEDVVFSGGLEIKEDKATLYAGISDAEAQFIIIDNPFK
Sequences:
>Translated_305_residues MKDMKTCEILLAEYLKSESKIYGVEKINFINVGENDVYNISAPFVDNDKTIIAGRVEARDSEHSTVYFFEKNDEGWSPID SYPTFSLQDPFFTKINNELIVGGVEIFPHPEIEGTLKWRTIFYKGKDVASLERFFVGPDGMKDLRLVQLLDKRIGVLTRP QGEKGGRGRIGFSIINTLEELNIKVIEESPLLDGLFVDEEWGGANEARPLNETTLGILGHVACFDKDGNRHYYPMTFELN INTLEVKNQKLIAVRKDFKPGQAKRPDLEDVVFSGGLEIKEDKATLYAGISDAEAQFIIIDNPFK >Mature_305_residues MKDMKTCEILLAEYLKSESKIYGVEKINFINVGENDVYNISAPFVDNDKTIIAGRVEARDSEHSTVYFFEKNDEGWSPID SYPTFSLQDPFFTKINNELIVGGVEIFPHPEIEGTLKWRTIFYKGKDVASLERFFVGPDGMKDLRLVQLLDKRIGVLTRP QGEKGGRGRIGFSIINTLEELNIKVIEESPLLDGLFVDEEWGGANEARPLNETTLGILGHVACFDKDGNRHYYPMTFELN INTLEVKNQKLIAVRKDFKPGQAKRPDLEDVVFSGGLEIKEDKATLYAGISDAEAQFIIIDNPFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34480; Mature: 34480
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDMKTCEILLAEYLKSESKIYGVEKINFINVGENDVYNISAPFVDNDKTIIAGRVEARD CCCHHHHHHHHHHHHCCCCEEECEEEEEEEECCCCCEEEEECCEECCCCEEEEEEEECCC SEHSTVYFFEKNDEGWSPIDSYPTFSLQDPFFTKINNELIVGGVEIFPHPEIEGTLKWRT CCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEECCCCCCCCEEEEEE IFYKGKDVASLERFFVGPDGMKDLRLVQLLDKRIGVLTRPQGEKGGRGRIGFSIINTLEE EEECCCCHHHHHHEEECCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHH LNIKVIEESPLLDGLFVDEEWGGANEARPLNETTLGILGHVACFDKDGNRHYYPMTFELN CCEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHEEEEEEEECCCCEEEEEEEEEEE INTLEVKNQKLIAVRKDFKPGQAKRPDLEDVVFSGGLEIKEDKATLYAGISDAEAQFIII EEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHCCCCEEEECCEEEEECCCCCCEEEEEE DNPFK ECCCC >Mature Secondary Structure MKDMKTCEILLAEYLKSESKIYGVEKINFINVGENDVYNISAPFVDNDKTIIAGRVEARD CCCHHHHHHHHHHHHCCCCEEECEEEEEEEECCCCCEEEEECCEECCCCEEEEEEEECCC SEHSTVYFFEKNDEGWSPIDSYPTFSLQDPFFTKINNELIVGGVEIFPHPEIEGTLKWRT CCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEECCCCCCCCEEEEEE IFYKGKDVASLERFFVGPDGMKDLRLVQLLDKRIGVLTRPQGEKGGRGRIGFSIINTLEE EEECCCCHHHHHHEEECCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHH LNIKVIEESPLLDGLFVDEEWGGANEARPLNETTLGILGHVACFDKDGNRHYYPMTFELN CCEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHEEEEEEEECCCCEEEEEEEEEEE INTLEVKNQKLIAVRKDFKPGQAKRPDLEDVVFSGGLEIKEDKATLYAGISDAEAQFIII EEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHCCCCEEEECCEEEEECCCCCCEEEEEE DNPFK ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA