| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932665
Identifier: 187932665
GI number: 187932665
Start: 2473946
End: 2475253
Strand: Reverse
Name: 187932665
Synonym: CLL_A2383
Alternate gene names: NA
Gene position: 2475253-2473946 (Counterclockwise)
Preceding gene: 187933480
Following gene: 187934536
Centisome position: 65.13
GC content: 26.45
Gene sequence:
>1308_bases ATGAAAAAAATAGAAGAATATATTAAAAATGAATATAAAAATAACGCTTTGTGGTTTATAGATGAAGTTAATAAACCTAG TAATACAACAAGAATTGGAAAAGTAAGAGGTTTAAAAAATTATTTACATGGAAAACATAAAACATTAACTAGACAAGATT GTAAATTTAAAGAACAGGAATTTAAAGTTAAGAAATTAGTATTACAAAATGCAAAGACTATATTAAACTTTCATTCAATT TATTTATTAGGGAATCCAATATCATTAACAGGAACAGAAGAGTTAATTGATAAATTACAAGATATTTATAATTATGGTTC ATATAATGATGTTGATTTTGAGTTATTAGATAAATTAGTTAAGTATGGTGATAGTTACGAGTATATCTATATTGATGATA ATGATAATATCACTTCAAAAGTAATTGATAATAGTTGTAGTTATCCTGTTTATAATGAAAAAGGTGAATATATAGCGTTT ATTGAACATTGGAGTAATATTGAAAATAAGAATTATTGGATTGTATATTATAAAGATTGTATACAAGAATTTAATGATTT AGGCGATAAAGTTTCTATGGTTGGAGAGTATAAAAATATTAGTGGTTTACCTCTACATTATAAGGGAATTAATGACTGGG ATAATACAATGGGTGAAGGTTTATTAGAGAATGTTATACCTATATTAGATGAAATAGAAGATTTAATGAGTAAGATGGGT GATGCAATTTATACATTATCTTTGAATCCTTTATTATTTACCACAGGACAAGCTATTGAGGGAAATGGCGTTTCTAATGA TATGGTTGGTATGAATGTAGCTTTAGAGAATGGTTCAAGTATGGAATATGTATCAGCTATTATGGATTATTCTACTATTA AATATTACTTAGATACACTACAAAATGAATTAAATGTTATATCTTATATGCCTAGTATATTAGGTGGTAATGGTAATATA GCCAACGTTAGTGAAGTATCTTTAAAGATGTTATATTCATTGGCTGATGTCTATGCGATGTTAAATGAGAAAGTATTAAG ACGTGGGTTTAATGAGAGGTTTAACATTATTAGACGATTGATAGGTGAAGAAGATAGAAAACAATATGTAAATGTTACAT TTAATTATAGTAGACCACAAAACGCTAGTGAGTTATTAGACAACATGAAGAAACAATTTGATATGAACGCTATAAGCTTA CAAACAATTATAGAGAAATCTCCATTAACAGATGACGTAGTTATGGAGTTAGAAAGATTGGAACAAAATTGTAATGTTAA GAGTGAGAGCGATGAAAAGAGTAAATAG
Upstream 100 bases:
>100_bases AGCTTGTCGGTTGCCAACGTTGGCAATGCCATTATAGCGAATGTTAATTATTGTGGTTCTTGAGAGAACTAAACAAGAGA AAGAAAGGAAGATTAAACTA
Downstream 100 bases:
>100_bases ACATTTGGAAAATTAAAATGGGTTTTATTAGTAAAATTAATAGGAACAAATGTTTGGTTGGAGTTGTTGTCAGATAAATT TTAAAAGGGTAATTAGTATG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Portal Protein
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKKIEEYIKNEYKNNALWFIDEVNKPSNTTRIGKVRGLKNYLHGKHKTLTRQDCKFKEQEFKVKKLVLQNAKTILNFHSI YLLGNPISLTGTEELIDKLQDIYNYGSYNDVDFELLDKLVKYGDSYEYIYIDDNDNITSKVIDNSCSYPVYNEKGEYIAF IEHWSNIENKNYWIVYYKDCIQEFNDLGDKVSMVGEYKNISGLPLHYKGINDWDNTMGEGLLENVIPILDEIEDLMSKMG DAIYTLSLNPLLFTTGQAIEGNGVSNDMVGMNVALENGSSMEYVSAIMDYSTIKYYLDTLQNELNVISYMPSILGGNGNI ANVSEVSLKMLYSLADVYAMLNEKVLRRGFNERFNIIRRLIGEEDRKQYVNVTFNYSRPQNASELLDNMKKQFDMNAISL QTIIEKSPLTDDVVMELERLEQNCNVKSESDEKSK
Sequences:
>Translated_435_residues MKKIEEYIKNEYKNNALWFIDEVNKPSNTTRIGKVRGLKNYLHGKHKTLTRQDCKFKEQEFKVKKLVLQNAKTILNFHSI YLLGNPISLTGTEELIDKLQDIYNYGSYNDVDFELLDKLVKYGDSYEYIYIDDNDNITSKVIDNSCSYPVYNEKGEYIAF IEHWSNIENKNYWIVYYKDCIQEFNDLGDKVSMVGEYKNISGLPLHYKGINDWDNTMGEGLLENVIPILDEIEDLMSKMG DAIYTLSLNPLLFTTGQAIEGNGVSNDMVGMNVALENGSSMEYVSAIMDYSTIKYYLDTLQNELNVISYMPSILGGNGNI ANVSEVSLKMLYSLADVYAMLNEKVLRRGFNERFNIIRRLIGEEDRKQYVNVTFNYSRPQNASELLDNMKKQFDMNAISL QTIIEKSPLTDDVVMELERLEQNCNVKSESDEKSK >Mature_435_residues MKKIEEYIKNEYKNNALWFIDEVNKPSNTTRIGKVRGLKNYLHGKHKTLTRQDCKFKEQEFKVKKLVLQNAKTILNFHSI YLLGNPISLTGTEELIDKLQDIYNYGSYNDVDFELLDKLVKYGDSYEYIYIDDNDNITSKVIDNSCSYPVYNEKGEYIAF IEHWSNIENKNYWIVYYKDCIQEFNDLGDKVSMVGEYKNISGLPLHYKGINDWDNTMGEGLLENVIPILDEIEDLMSKMG DAIYTLSLNPLLFTTGQAIEGNGVSNDMVGMNVALENGSSMEYVSAIMDYSTIKYYLDTLQNELNVISYMPSILGGNGNI ANVSEVSLKMLYSLADVYAMLNEKVLRRGFNERFNIIRRLIGEEDRKQYVNVTFNYSRPQNASELLDNMKKQFDMNAISL QTIIEKSPLTDDVVMELERLEQNCNVKSESDEKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50207; Mature: 50207
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIEEYIKNEYKNNALWFIDEVNKPSNTTRIGKVRGLKNYLHGKHKTLTRQDCKFKEQE CCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHH FKVKKLVLQNAKTILNFHSIYLLGNPISLTGTEELIDKLQDIYNYGSYNDVDFELLDKLV HHHHHHHHHHHHHHHHHHEEEEECCCEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH KYGDSYEYIYIDDNDNITSKVIDNSCSYPVYNEKGEYIAFIEHWSNIENKNYWIVYYKDC HCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCCCCCEEEEEHHHH IQEFNDLGDKVSMVGEYKNISGLPLHYKGINDWDNTMGEGLLENVIPILDEIEDLMSKMG HHHHHHCCHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DAIYTLSLNPLLFTTGQAIEGNGVSNDMVGMNVALENGSSMEYVSAIMDYSTIKYYLDTL CEEEEEECCCEEEECCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH QNELNVISYMPSILGGNGNIANVSEVSLKMLYSLADVYAMLNEKVLRRGFNERFNIIRRL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IGEEDRKQYVNVTFNYSRPQNASELLDNMKKQFDMNAISLQTIIEKSPLTDDVVMELERL HCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHH EQNCNVKSESDEKSK HHHCCCCCCCCCCCC >Mature Secondary Structure MKKIEEYIKNEYKNNALWFIDEVNKPSNTTRIGKVRGLKNYLHGKHKTLTRQDCKFKEQE CCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHH FKVKKLVLQNAKTILNFHSIYLLGNPISLTGTEELIDKLQDIYNYGSYNDVDFELLDKLV HHHHHHHHHHHHHHHHHHEEEEECCCEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH KYGDSYEYIYIDDNDNITSKVIDNSCSYPVYNEKGEYIAFIEHWSNIENKNYWIVYYKDC HCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCCCCCEEEEEHHHH IQEFNDLGDKVSMVGEYKNISGLPLHYKGINDWDNTMGEGLLENVIPILDEIEDLMSKMG HHHHHHCCHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DAIYTLSLNPLLFTTGQAIEGNGVSNDMVGMNVALENGSSMEYVSAIMDYSTIKYYLDTL CEEEEEECCCEEEECCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH QNELNVISYMPSILGGNGNIANVSEVSLKMLYSLADVYAMLNEKVLRRGFNERFNIIRRL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IGEEDRKQYVNVTFNYSRPQNASELLDNMKKQFDMNAISLQTIIEKSPLTDDVVMELERL HCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHH EQNCNVKSESDEKSK HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA