| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187932602
Identifier: 187932602
GI number: 187932602
Start: 2396839
End: 2398350
Strand: Reverse
Name: 187932602
Synonym: CLL_A2322
Alternate gene names: NA
Gene position: 2398350-2396839 (Counterclockwise)
Preceding gene: 187933580
Following gene: 187935577
Centisome position: 63.11
GC content: 28.04
Gene sequence:
>1512_bases ATGATTGATAAAAGAGACAAGACGATTTATTATGTATCAAACTTAGGCACAGGAACAGTGTCTATTATTGATGGAGATAA TGATTGTATTATAAAGGAAATTGAAATAGGTCCAAGACCTCAAAATATCATTGTAGATGAAAAAAATAATGTGTATATAG CTAGTGATAGAAATGGTAAAGTCACACTCATTAATGACTTATATGATTCTAACAAAACATGGAACATGCCTAATAATGGT AATATACAAGTGGATTCCATCACTCAGAATATTTATGTTTGTGATACAGAAGAAGTATGTATTTATAGTTTGAAAACTGG TGAAAAGATTGGATGCTTAACGGGTTTTATTGCTGCAGATAGTTTAAAACTTGATAAGGACAAGAAAAGATTATTTGTAT TGGATATTCTACAAAATGAAATAAAAGTTTATGATACATCAGATTTACATTTAATTAAGTTATATAAAGATGTTGGAACT TCACCGAACTACATTTTTATATCAGAAAATGAAAAGGATGTTTATATTTCCAATAAAGGAGTTAATAGACCCACTTATAC AAGCAATATTTCCGTATTGGATCTTGAAAGCGGAAATATTTCATATATATATCTAGAAAAGGGATCTGTTATTACTGCAT TGGAACAAAATGAAAATTTTTTATATGCAGCAAATAGTGGATTACATAGAATTGATGTTATAAATATATTAAAAAGAGAA TGTGTAGCAACAATAAAAACAACTTTAACAGAATTGCAAAAACTTCGATTATCTCCTGATAAAAAAACACTACTTGCAAC TAGTAGGAGTAATGATGGAAAGGGAGTAATTGATAGAATAGATACTTCTAGTAATACTATTCTAGGTACATTTACATTTA AACAAAATAACAGTCTTCCATATGATATTGGAGTGATTATTCAGAGTAAATTTGAAGTACAAGATGAATCTTTTATTTTG ACGAATTCAGAAAATAAATTGAAACAAGAAAATGGAACTTCAATACTTGCTAAGAAGGTTTTATCAACTTATCAAGAAAA AATGATTTTTCCTGAAGTATCAGTTAAAGTATGTTTAGAAGAAGGAGAAATTATAAATATAGAAGAAATAATATTTAAAA AGTGTGAAATTATAAATGAAACAAAAAATAGAAGTATTATAGATAGTCGGAAAGATTATTCAATATTACAATATAATTTT TATATTCCGTATTGCATTGGATATACTGATGAACAGCAGCAAAAATATATTATTGAAGGAAGACTAGAGGGAACTCAGAA AGCTACATTATATATACCGGCTTATGCAGAACAGCAGGGAGTAGAATTTGTAATCAATTCGTTTGCCAAAGTAACAAACA CCCCAATCATTGTGAATAAGAATTTGAAGTTTGACGTTAGTGCTTTGATTTCGACAAAAGCAATTGTGGATGAAATAGTA TTTATTCCATTTTGTAAGGAATGTGAGATGTGGCAAAGGAGAGATGAAAAAATGAGGGAAAATAATGGTTAA
Upstream 100 bases:
>100_bases AATAGATCTGGTTATCCAGGTCTTTTCATATTTTTATTGAATAATAAGCACTGATAAAGCATATCCTTTAGTATAAGTAA TTGGGGGGGATGGCGACTTT
Downstream 100 bases:
>100_bases CGAAAAATATGATTGTTATTTGATTAAGGAGAAAGATGATACACTTCTAAAATTTTCTTATAATAGTCAAGATGGGGTAT ATTATCAAATATTTATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MIDKRDKTIYYVSNLGTGTVSIIDGDNDCIIKEIEIGPRPQNIIVDEKNNVYIASDRNGKVTLINDLYDSNKTWNMPNNG NIQVDSITQNIYVCDTEEVCIYSLKTGEKIGCLTGFIAADSLKLDKDKKRLFVLDILQNEIKVYDTSDLHLIKLYKDVGT SPNYIFISENEKDVYISNKGVNRPTYTSNISVLDLESGNISYIYLEKGSVITALEQNENFLYAANSGLHRIDVINILKRE CVATIKTTLTELQKLRLSPDKKTLLATSRSNDGKGVIDRIDTSSNTILGTFTFKQNNSLPYDIGVIIQSKFEVQDESFIL TNSENKLKQENGTSILAKKVLSTYQEKMIFPEVSVKVCLEEGEIINIEEIIFKKCEIINETKNRSIIDSRKDYSILQYNF YIPYCIGYTDEQQQKYIIEGRLEGTQKATLYIPAYAEQQGVEFVINSFAKVTNTPIIVNKNLKFDVSALISTKAIVDEIV FIPFCKECEMWQRRDEKMRENNG
Sequences:
>Translated_503_residues MIDKRDKTIYYVSNLGTGTVSIIDGDNDCIIKEIEIGPRPQNIIVDEKNNVYIASDRNGKVTLINDLYDSNKTWNMPNNG NIQVDSITQNIYVCDTEEVCIYSLKTGEKIGCLTGFIAADSLKLDKDKKRLFVLDILQNEIKVYDTSDLHLIKLYKDVGT SPNYIFISENEKDVYISNKGVNRPTYTSNISVLDLESGNISYIYLEKGSVITALEQNENFLYAANSGLHRIDVINILKRE CVATIKTTLTELQKLRLSPDKKTLLATSRSNDGKGVIDRIDTSSNTILGTFTFKQNNSLPYDIGVIIQSKFEVQDESFIL TNSENKLKQENGTSILAKKVLSTYQEKMIFPEVSVKVCLEEGEIINIEEIIFKKCEIINETKNRSIIDSRKDYSILQYNF YIPYCIGYTDEQQQKYIIEGRLEGTQKATLYIPAYAEQQGVEFVINSFAKVTNTPIIVNKNLKFDVSALISTKAIVDEIV FIPFCKECEMWQRRDEKMRENNG >Mature_503_residues MIDKRDKTIYYVSNLGTGTVSIIDGDNDCIIKEIEIGPRPQNIIVDEKNNVYIASDRNGKVTLINDLYDSNKTWNMPNNG NIQVDSITQNIYVCDTEEVCIYSLKTGEKIGCLTGFIAADSLKLDKDKKRLFVLDILQNEIKVYDTSDLHLIKLYKDVGT SPNYIFISENEKDVYISNKGVNRPTYTSNISVLDLESGNISYIYLEKGSVITALEQNENFLYAANSGLHRIDVINILKRE CVATIKTTLTELQKLRLSPDKKTLLATSRSNDGKGVIDRIDTSSNTILGTFTFKQNNSLPYDIGVIIQSKFEVQDESFIL TNSENKLKQENGTSILAKKVLSTYQEKMIFPEVSVKVCLEEGEIINIEEIIFKKCEIINETKNRSIIDSRKDYSILQYNF YIPYCIGYTDEQQQKYIIEGRLEGTQKATLYIPAYAEQQGVEFVINSFAKVTNTPIIVNKNLKFDVSALISTKAIVDEIV FIPFCKECEMWQRRDEKMRENNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57225; Mature: 57225
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDKRDKTIYYVSNLGTGTVSIIDGDNDCIIKEIEIGPRPQNIIVDEKNNVYIASDRNGK CCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCC VTLINDLYDSNKTWNMPNNGNIQVDSITQNIYVCDTEEVCIYSLKTGEKIGCLTGFIAAD EEEEECCCCCCCEECCCCCCCEEEEEEECEEEEECCCCEEEEEECCCCEEEEEEEEEEEC SLKLDKDKKRLFVLDILQNEIKVYDTSDLHLIKLYKDVGTSPNYIFISENEKDVYISNKG CEEECCCCCEEEEEEECCCCEEEEECCCEEEEEEEHHCCCCCCEEEEECCCCEEEEECCC VNRPTYTSNISVLDLESGNISYIYLEKGSVITALEQNENFLYAANSGLHRIDVINILKRE CCCCEEECCEEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEECCCCEEEHHHHHHHHH CVATIKTTLTELQKLRLSPDKKTLLATSRSNDGKGVIDRIDTSSNTILGTFTFKQNNSLP HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC YDIGVIIQSKFEVQDESFILTNSENKLKQENGTSILAKKVLSTYQEKMIFPEVSVKVCLE EEEEEEEEEEEEECCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEC EGEIINIEEIIFKKCEIINETKNRSIIDSRKDYSILQYNFYIPYCIGYTDEQQQKYIIEG CCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEE RLEGTQKATLYIPAYAEQQGVEFVINSFAKVTNTPIIVNKNLKFDVSALISTKAIVDEIV ECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHHHHE FIPFCKECEMWQRRDEKMRENNG EECCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIDKRDKTIYYVSNLGTGTVSIIDGDNDCIIKEIEIGPRPQNIIVDEKNNVYIASDRNGK CCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCC VTLINDLYDSNKTWNMPNNGNIQVDSITQNIYVCDTEEVCIYSLKTGEKIGCLTGFIAAD EEEEECCCCCCCEECCCCCCCEEEEEEECEEEEECCCCEEEEEECCCCEEEEEEEEEEEC SLKLDKDKKRLFVLDILQNEIKVYDTSDLHLIKLYKDVGTSPNYIFISENEKDVYISNKG CEEECCCCCEEEEEEECCCCEEEEECCCEEEEEEEHHCCCCCCEEEEECCCCEEEEECCC VNRPTYTSNISVLDLESGNISYIYLEKGSVITALEQNENFLYAANSGLHRIDVINILKRE CCCCEEECCEEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEECCCCEEEHHHHHHHHH CVATIKTTLTELQKLRLSPDKKTLLATSRSNDGKGVIDRIDTSSNTILGTFTFKQNNSLP HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC YDIGVIIQSKFEVQDESFILTNSENKLKQENGTSILAKKVLSTYQEKMIFPEVSVKVCLE EEEEEEEEEEEEECCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEC EGEIINIEEIIFKKCEIINETKNRSIIDSRKDYSILQYNFYIPYCIGYTDEQQQKYIIEG CCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEE RLEGTQKATLYIPAYAEQQGVEFVINSFAKVTNTPIIVNKNLKFDVSALISTKAIVDEIV ECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHHHHE FIPFCKECEMWQRRDEKMRENNG EECCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA