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The map label for this gene is ywpD [H]

Identifier: 187932549

GI number: 187932549

Start: 2202484

End: 2203725

Strand: Reverse

Name: ywpD [H]

Synonym: CLL_A2107

Alternate gene names: 187932549

Gene position: 2203725-2202484 (Counterclockwise)

Preceding gene: 187934267

Following gene: 187933561

Centisome position: 57.99

GC content: 27.7

Gene sequence:

>1242_bases
ATGGAAAAAGTATTGCATTTGAAAGATGCTATTGATATAAATGCTTTTCAGAAAATACAAGATGATATATCAGATGCTAC
AGAAATGTCTATAATAACTGTTGATTATATGGGGAAATGTGCAACCAAACATAGTAGATGTAGTGAATTCTGTAAGCTTA
TGAGAGCAAGTGATTCATATTCTCAGTTGTGTGAACGTTGCGATTCACGTGGTGGTTTAGAAGCAGCTAGATTAGAAAAG
CCATATATATACAAATGTCATAAAGGATTAATAGATTTTGCTACTCCTATAATTGTTGATGGTCAATATTTAGGTTCGGT
AATGGCAGGTCAAGTGTTAATGGAAGATGATGAAAAAGTTAATTTAGAGAAAATAGTAAACTCAGAAAATAATTTTGATA
GCTTAAAAAAAGAAGAAAAAGAAAAGTTATTAGAGGCTTATAATAAATTGCCTGTGGTTAGCTTTGAAAGAATACAAGCA
GTGGCGCAAATGATGTTTCATATAAGCAACTATATTGTAGAAGAAGCTGTATCTAAAATAGTTCAAAGAGAGCTAGATGA
AAAAAAAGTGAAATTTGCAGAAAGTGAAAAAATGCAAGCTGAGTTAGAAAAAGAATATAAGGCATCTCAATTAAAAGCCC
TTCAATCTCAGATAAACCCACATTTCTTATTTAATGTATTAAATAGCATATCCTCTTTATCAATAGTTGAGAATGCACCT
AAAACTCAAGAAGTTATATATAATCTATCTAATATGCTAAGATACACTTTAAAAAAGGCAAATAAAATTGTTAGCTTAGA
AGAAGAGTTTGACTATATAAATTCATATTTAAATCTTCAAAAGGTAAGGTTTTCAGATAGATTAAAGTATGAAATTAATA
TTGATAAACAATTTAAAAATATAAGAATACCTTTTATGGTTATTCAAACTTTTGTAGAAAATTCTGTTGTACATGGACTT
GAGACAAAAGAAGAAGGTGGCTATATAAAAATTTTTGTAGAAGATGCAAATGAATATGTAATAGTACATATAGAAGATAA
TGGTACAGGAATACCTAAAGAACAACTTAATTTAATGAAAGAAGAACTAAAAATAAGAGATGATAATAATTTAGATAAAA
TAGGAATAAACAATGCAAATAAAAGAATGGCTTATTATTACGGGGATGAATATAAAATAGATATAACTAGCAAAATAAGA
GTAGGAACTTCAGTAAAAATAACTATTAAGAAAGAAGTTTAG

Upstream 100 bases:

>100_bases
ACGAATAATTTCAAATTGTAATTTACATATAAAAAATAATATAATAAAATTAAATAAAATAATTAAAACTTGTTAGAATA
ATGAGAAAGGAGATGGAAAT

Downstream 100 bases:

>100_bases
CTAGGAGTTGAATAAATGCTTAATATAATGATTGTTGATGATGAAATTTTGGAAAGGCAAGCTTTAAAGATGATTATAAA
TAACTCAGATAGTGGAAGGG

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MEKVLHLKDAIDINAFQKIQDDISDATEMSIITVDYMGKCATKHSRCSEFCKLMRASDSYSQLCERCDSRGGLEAARLEK
PYIYKCHKGLIDFATPIIVDGQYLGSVMAGQVLMEDDEKVNLEKIVNSENNFDSLKKEEKEKLLEAYNKLPVVSFERIQA
VAQMMFHISNYIVEEAVSKIVQRELDEKKVKFAESEKMQAELEKEYKASQLKALQSQINPHFLFNVLNSISSLSIVENAP
KTQEVIYNLSNMLRYTLKKANKIVSLEEEFDYINSYLNLQKVRFSDRLKYEINIDKQFKNIRIPFMVIQTFVENSVVHGL
ETKEEGGYIKIFVEDANEYVIVHIEDNGTGIPKEQLNLMKEELKIRDDNNLDKIGINNANKRMAYYYGDEYKIDITSKIR
VGTSVKITIKKEV

Sequences:

>Translated_413_residues
MEKVLHLKDAIDINAFQKIQDDISDATEMSIITVDYMGKCATKHSRCSEFCKLMRASDSYSQLCERCDSRGGLEAARLEK
PYIYKCHKGLIDFATPIIVDGQYLGSVMAGQVLMEDDEKVNLEKIVNSENNFDSLKKEEKEKLLEAYNKLPVVSFERIQA
VAQMMFHISNYIVEEAVSKIVQRELDEKKVKFAESEKMQAELEKEYKASQLKALQSQINPHFLFNVLNSISSLSIVENAP
KTQEVIYNLSNMLRYTLKKANKIVSLEEEFDYINSYLNLQKVRFSDRLKYEINIDKQFKNIRIPFMVIQTFVENSVVHGL
ETKEEGGYIKIFVEDANEYVIVHIEDNGTGIPKEQLNLMKEELKIRDDNNLDKIGINNANKRMAYYYGDEYKIDITSKIR
VGTSVKITIKKEV
>Mature_413_residues
MEKVLHLKDAIDINAFQKIQDDISDATEMSIITVDYMGKCATKHSRCSEFCKLMRASDSYSQLCERCDSRGGLEAARLEK
PYIYKCHKGLIDFATPIIVDGQYLGSVMAGQVLMEDDEKVNLEKIVNSENNFDSLKKEEKEKLLEAYNKLPVVSFERIQA
VAQMMFHISNYIVEEAVSKIVQRELDEKKVKFAESEKMQAELEKEYKASQLKALQSQINPHFLFNVLNSISSLSIVENAP
KTQEVIYNLSNMLRYTLKKANKIVSLEEEFDYINSYLNLQKVRFSDRLKYEINIDKQFKNIRIPFMVIQTFVENSVVHGL
ETKEEGGYIKIFVEDANEYVIVHIEDNGTGIPKEQLNLMKEELKIRDDNNLDKIGINNANKRMAYYYGDEYKIDITSKIR
VGTSVKITIKKEV

Specific function: Unknown

COG id: COG2972

COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788446, Length=218, Percent_Identity=27.5229357798165, Blast_Score=111, Evalue=9e-26,
Organism=Escherichia coli, GI1788723, Length=240, Percent_Identity=31.6666666666667, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR010559
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF06580 His_kinase [H]

EC number: NA

Molecular weight: Translated: 47654; Mature: 47654

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVLHLKDAIDINAFQKIQDDISDATEMSIITVDYMGKCATKHSRCSEFCKLMRASDSY
CCCHHHHHHHCCHHHHHHHHHHHCCHHHEEEEEEEHHHHHHCCHHHHHHHHHHHHCCCHH
SQLCERCDSRGGLEAARLEKPYIYKCHKGLIDFATPIIVDGQYLGSVMAGQVLMEDDEKV
HHHHHHHCCCCCCCHHHCCCCCHHHHHCCHHHHCCCEEECHHHHHHHHHCHHEECCCCCC
NLEKIVNSENNFDSLKKEEKEKLLEAYNKLPVVSFERIQAVAQMMFHISNYIVEEAVSKI
CHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VQRELDEKKVKFAESEKMQAELEKEYKASQLKALQSQINPHFLFNVLNSISSLSIVENAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
KTQEVIYNLSNMLRYTLKKANKIVSLEEEFDYINSYLNLQKVRFSDRLKYEINIDKQFKN
HHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCHHC
IRIPFMVIQTFVENSVVHGLETKEEGGYIKIFVEDANEYVIVHIEDNGTGIPKEQLNLMK
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHH
EELKIRDDNNLDKIGINNANKRMAYYYGDEYKIDITSKIRVGTSVKITIKKEV
HHHHCCCCCCCCEECCCCCCCEEEEEECCEEEEEEEEEEEECCEEEEEEEECC
>Mature Secondary Structure
MEKVLHLKDAIDINAFQKIQDDISDATEMSIITVDYMGKCATKHSRCSEFCKLMRASDSY
CCCHHHHHHHCCHHHHHHHHHHHCCHHHEEEEEEEHHHHHHCCHHHHHHHHHHHHCCCHH
SQLCERCDSRGGLEAARLEKPYIYKCHKGLIDFATPIIVDGQYLGSVMAGQVLMEDDEKV
HHHHHHHCCCCCCCHHHCCCCCHHHHHCCHHHHCCCEEECHHHHHHHHHCHHEECCCCCC
NLEKIVNSENNFDSLKKEEKEKLLEAYNKLPVVSFERIQAVAQMMFHISNYIVEEAVSKI
CHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VQRELDEKKVKFAESEKMQAELEKEYKASQLKALQSQINPHFLFNVLNSISSLSIVENAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
KTQEVIYNLSNMLRYTLKKANKIVSLEEEFDYINSYLNLQKVRFSDRLKYEINIDKQFKN
HHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCHHC
IRIPFMVIQTFVENSVVHGLETKEEGGYIKIFVEDANEYVIVHIEDNGTGIPKEQLNLMK
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHH
EELKIRDDNNLDKIGINNANKRMAYYYGDEYKIDITSKIRVGTSVKITIKKEV
HHHHCCCCCCCCEECCCCCCCEEEEEECCEEEEEEEEEEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]