| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932537
Identifier: 187932537
GI number: 187932537
Start: 2870356
End: 2871099
Strand: Reverse
Name: 187932537
Synonym: CLL_A2788
Alternate gene names: NA
Gene position: 2871099-2870356 (Counterclockwise)
Preceding gene: 187935764
Following gene: 187933270
Centisome position: 75.55
GC content: 29.17
Gene sequence:
>744_bases ATGTATGGGACTTATGAAGAACCATTATTTTTAGCTAAAGATGTTGCTGAATGGATTGATTATGATGAAAGTAAAGTTGG TCAAATGATTAAAAACATTGATGAAGATGAAAAGGAAACCTCACCGATATTTTATAGTGGTCAGATTAGGAATATGTATT TTTTAACAGAAGATGGATTATATGAAGTCCTAATGCAAAGTAAAAAACCAATTGCTAAGAAATTTAAAAAAGAAATCAAG AAAATTTTAAGGCAAATAAGAAAAACAGGTGGATATCTCGGAACTGATGAGAGCATGACTGATGAAGAAATAATGGCAAA AGCGTTATTGGTCGCACAAAATACTATTAATAAGAAAAATGAATTATTAAAAGCTAAGGAAGAAGAAATCCAAGCTAAAG AGAAACAACTTACTGAAACTAAAGAGGATTTAAATAATAAGAATAAGTTTATTAATCAAATCGCAGTAAGCGAGAACAGT CTTTTAGTTAGAGAGTGTGCAAAGATAGCATCTAAGAATGGTGTAATAATTGGTGAAAGAAGATTGTGGGATAAGCTTAG GGCTTGGGGATTTATCTTTAAAAATTTAACCGAAGCAAAACAAGATGGAATTGATAGAGGATACTTTGAAATTGTTGAAG GTTCTAAAACTAATAAAGATAAAACATTTACTTATAAAACTACAAGAGTTACTGGAAAAGGACAAATATATATAATTAAT AGATTACTTAAGGAGGCTATATAA
Upstream 100 bases:
>100_bases ATTGAGTGAAGAATTTGTACAAGCTTCTATTATAGAAGACAGAACTAAAAAGCAAATTCAAATTTTAGATTAAAGAAAGT TGTTAGAGAATGATTTTAAA
Downstream 100 bases:
>100_bases ATGGAAGAAATGCTTTATACAGTAAAAGAAGCATCAAAAATATTAAAAACTAATACCGATTTTGTCTATTCATTAATTAG AAAAGGATATTTAAGATGTT
Product: antirepressor, phage associated
Products: NA
Alternate protein names: Antirepressor; Phage Antirepressor; Phage-Encoded Protein; Bacteriophage Antirepressor; Anti-Repressor
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MYGTYEEPLFLAKDVAEWIDYDESKVGQMIKNIDEDEKETSPIFYSGQIRNMYFLTEDGLYEVLMQSKKPIAKKFKKEIK KILRQIRKTGGYLGTDESMTDEEIMAKALLVAQNTINKKNELLKAKEEEIQAKEKQLTETKEDLNNKNKFINQIAVSENS LLVRECAKIASKNGVIIGERRLWDKLRAWGFIFKNLTEAKQDGIDRGYFEIVEGSKTNKDKTFTYKTTRVTGKGQIYIIN RLLKEAI
Sequences:
>Translated_247_residues MYGTYEEPLFLAKDVAEWIDYDESKVGQMIKNIDEDEKETSPIFYSGQIRNMYFLTEDGLYEVLMQSKKPIAKKFKKEIK KILRQIRKTGGYLGTDESMTDEEIMAKALLVAQNTINKKNELLKAKEEEIQAKEKQLTETKEDLNNKNKFINQIAVSENS LLVRECAKIASKNGVIIGERRLWDKLRAWGFIFKNLTEAKQDGIDRGYFEIVEGSKTNKDKTFTYKTTRVTGKGQIYIIN RLLKEAI >Mature_247_residues MYGTYEEPLFLAKDVAEWIDYDESKVGQMIKNIDEDEKETSPIFYSGQIRNMYFLTEDGLYEVLMQSKKPIAKKFKKEIK KILRQIRKTGGYLGTDESMTDEEIMAKALLVAQNTINKKNELLKAKEEEIQAKEKQLTETKEDLNNKNKFINQIAVSENS LLVRECAKIASKNGVIIGERRLWDKLRAWGFIFKNLTEAKQDGIDRGYFEIVEGSKTNKDKTFTYKTTRVTGKGQIYIIN RLLKEAI
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28619; Mature: 28619
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGTYEEPLFLAKDVAEWIDYDESKVGQMIKNIDEDEKETSPIFYSGQIRNMYFLTEDGL CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCEEEECCCCEEEEEECCHH YEVLMQSKKPIAKKFKKEIKKILRQIRKTGGYLGTDESMTDEEIMAKALLVAQNTINKKN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ELLKAKEEEIQAKEKQLTETKEDLNNKNKFINQIAVSENSLLVRECAKIASKNGVIIGER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHH RLWDKLRAWGFIFKNLTEAKQDGIDRGYFEIVEGSKTNKDKTFTYKTTRVTGKGQIYIIN HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEEEEEECCCEEEHHH RLLKEAI HHHHHCC >Mature Secondary Structure MYGTYEEPLFLAKDVAEWIDYDESKVGQMIKNIDEDEKETSPIFYSGQIRNMYFLTEDGL CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCEEEECCCCEEEEEECCHH YEVLMQSKKPIAKKFKKEIKKILRQIRKTGGYLGTDESMTDEEIMAKALLVAQNTINKKN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ELLKAKEEEIQAKEKQLTETKEDLNNKNKFINQIAVSENSLLVRECAKIASKNGVIIGER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHH RLWDKLRAWGFIFKNLTEAKQDGIDRGYFEIVEGSKTNKDKTFTYKTTRVTGKGQIYIIN HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEEEEEECCCEEEHHH RLLKEAI HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA