| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932502
Identifier: 187932502
GI number: 187932502
Start: 2012899
End: 2013588
Strand: Reverse
Name: 187932502
Synonym: CLL_A1927
Alternate gene names: NA
Gene position: 2013588-2012899 (Counterclockwise)
Preceding gene: 187933636
Following gene: 187935774
Centisome position: 52.98
GC content: 25.07
Gene sequence:
>690_bases ATGGAAAACAAATTATTAAATCTTACAAGTGATAAGGAATTAAGAATAACAAGCGTAGAATTAGTTGATATTATAAATGA TTTTAGAAGATTAGAGAGCAAAAGTACTGGAAAAGAGTATGTTTCAATTCAACATAATACTTTTATGAGAAAAATAAGAA ATGAAATAGAAACATTAGATTTACTAGGTTTGGAAGGACAGAAAAATTTTGTACAGTCCTCATACGTTAATTCTCAAAAC AAAGTACAACCTTGCTATTCATTAAATAAATATGGAATGTTACAAATGCTAAATAGTGAATCTGTATTAGTTAGATATAA AACTATTGAATATATAAATGAACTTGAAGATGAAAATATGAAATTAAAAGAAGGACAACTATTAATTTCAGCTAAAGAAG AAATAAAGGAACTTAAAAGTACATTAGATGATTTTAAAAAAGCAACAGAAGAAGCAAAACAAATGTACAAACCTAGTCAT AAGAAAAAACTTGATTATAACAAAATGATAAAATCATTAACTAATAATAAAGAAGAAGCACAAGTAGTTAAGGATTGGGT ATTTGGTTTATTAAATATAAGCAAGTGGGAAGATACTTGTGCGAATGATACTAAAAGAATAATTGAAGCTATAAATACAG TAGCTAGATTATTAACTATAAAGAAATTTGAACAGTTAAGTATGCTTTAG
Upstream 100 bases:
>100_bases AGTAGTACATCAACTCTACTGGTTTTTATAGATAGGATTTGGAATTAAAGAAGTTCCCACCTATCTTTTTTATTTTATTT AAGAAAGGTAGGATGTAAAA
Downstream 100 bases:
>100_bases AATTCTAGAAATAGGGTTCTTTTTTAATGCAATAAAACAGAAAGTAGGTGAGAAATATGATTACAGTAATGGCATGGATA GTTTTAATAATTAATGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MENKLLNLTSDKELRITSVELVDIINDFRRLESKSTGKEYVSIQHNTFMRKIRNEIETLDLLGLEGQKNFVQSSYVNSQN KVQPCYSLNKYGMLQMLNSESVLVRYKTIEYINELEDENMKLKEGQLLISAKEEIKELKSTLDDFKKATEEAKQMYKPSH KKKLDYNKMIKSLTNNKEEAQVVKDWVFGLLNISKWEDTCANDTKRIIEAINTVARLLTIKKFEQLSML
Sequences:
>Translated_229_residues MENKLLNLTSDKELRITSVELVDIINDFRRLESKSTGKEYVSIQHNTFMRKIRNEIETLDLLGLEGQKNFVQSSYVNSQN KVQPCYSLNKYGMLQMLNSESVLVRYKTIEYINELEDENMKLKEGQLLISAKEEIKELKSTLDDFKKATEEAKQMYKPSH KKKLDYNKMIKSLTNNKEEAQVVKDWVFGLLNISKWEDTCANDTKRIIEAINTVARLLTIKKFEQLSML >Mature_229_residues MENKLLNLTSDKELRITSVELVDIINDFRRLESKSTGKEYVSIQHNTFMRKIRNEIETLDLLGLEGQKNFVQSSYVNSQN KVQPCYSLNKYGMLQMLNSESVLVRYKTIEYINELEDENMKLKEGQLLISAKEEIKELKSTLDDFKKATEEAKQMYKPSH KKKLDYNKMIKSLTNNKEEAQVVKDWVFGLLNISKWEDTCANDTKRIIEAINTVARLLTIKKFEQLSML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26773; Mature: 26773
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKLLNLTSDKELRITSVELVDIINDFRRLESKSTGKEYVSIQHNTFMRKIRNEIETLD CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHH LLGLEGQKNFVQSSYVNSQNKVQPCYSLNKYGMLQMLNSESVLVRYKTIEYINELEDENM HHCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCC KLKEGQLLISAKEEIKELKSTLDDFKKATEEAKQMYKPSHKKKLDYNKMIKSLTNNKEEA EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCHHHH QVVKDWVFGLLNISKWEDTCANDTKRIIEAINTVARLLTIKKFEQLSML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MENKLLNLTSDKELRITSVELVDIINDFRRLESKSTGKEYVSIQHNTFMRKIRNEIETLD CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHH LLGLEGQKNFVQSSYVNSQNKVQPCYSLNKYGMLQMLNSESVLVRYKTIEYINELEDENM HHCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCC KLKEGQLLISAKEEIKELKSTLDDFKKATEEAKQMYKPSHKKKLDYNKMIKSLTNNKEEA EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCHHHH QVVKDWVFGLLNISKWEDTCANDTKRIIEAINTVARLLTIKKFEQLSML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA