| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is yqeM [H]
Identifier: 187932387
GI number: 187932387
Start: 2575332
End: 2576069
Strand: Reverse
Name: yqeM [H]
Synonym: CLL_A2483
Alternate gene names: 187932387
Gene position: 2576069-2575332 (Counterclockwise)
Preceding gene: 187935684
Following gene: 187934312
Centisome position: 67.79
GC content: 23.58
Gene sequence:
>738_bases ATGGCTTATGGCGAATTTGCAAATATTTATGATAAGTTAATATATGAAGATATAAATTATGACTTAGTAGGTAATAGAAT TATAGAACTATGTAAAGAAAATAATATAAAATATGAAGACTACTTAGATTTAGCATGTGGGACAGGTAATGTATCAATAA ATGTAGCTACATATTTTAAAAATACATATGCCGTTGATTTGTCAGATGATATGTTAAATGTAGCATTTGATAAATTCAAA AAAAATAAAATCAAAGCAAAAATAATATGTCAAGATATGTGTGAGCTATCATTAAATCATAAATTTGATTTAATAACATC TGTTCTTGACTCAACAAATTATTTAACAGAATATGATGAGTTGATTAGTTACTTTAATAGAGTACATGAACATTTAAAAG ATGATGGAATATTTATTTTTGATATAAATTCTTATTACAAATTATCAACTATATTAGGTAATAATATTTATACATATAAT TCAGATGATGTATTTTATACATGGGAAAACGTATTTGAGGAAGACGTACTTAATATGTTTTTAACTTTTTTTGTTAAAAG TAAAGAAGAATTATATGAGAGATTTGAAGAGCAACACATAGAAAGAGCTTATAAAGAGGAAGAATTAGAAAAAGCTTTAA AAGACTGCAATTTTAAATTAGTAGGTAAGTTCGATAGTTACAGTAATAACTCTGTATTTAAAGAGAGTGAAAGAATAGTT TATGTTGTAAGTAAATAA
Upstream 100 bases:
>100_bases TTATAAGATAATTAGATTCTATTAAAGTTGACGAATTACTTATTAAGATATAATATAATTGTTGGAAATATATACGATAT TTTAAGGATGGGTAAAATTT
Downstream 100 bases:
>100_bases TGGAGGGCGATATTTATATGAAAGATAAAATAATTAGAGCAACAGCTAAAAATGGAATGGTTAGAATAATTGGAGGAATC ACGACAAACTTAGTTAATGA
Product: S-adenosylmethionine-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MAYGEFANIYDKLIYEDINYDLVGNRIIELCKENNIKYEDYLDLACGTGNVSINVATYFKNTYAVDLSDDMLNVAFDKFK KNKIKAKIICQDMCELSLNHKFDLITSVLDSTNYLTEYDELISYFNRVHEHLKDDGIFIFDINSYYKLSTILGNNIYTYN SDDVFYTWENVFEEDVLNMFLTFFVKSKEELYERFEEQHIERAYKEEELEKALKDCNFKLVGKFDSYSNNSVFKESERIV YVVSK
Sequences:
>Translated_245_residues MAYGEFANIYDKLIYEDINYDLVGNRIIELCKENNIKYEDYLDLACGTGNVSINVATYFKNTYAVDLSDDMLNVAFDKFK KNKIKAKIICQDMCELSLNHKFDLITSVLDSTNYLTEYDELISYFNRVHEHLKDDGIFIFDINSYYKLSTILGNNIYTYN SDDVFYTWENVFEEDVLNMFLTFFVKSKEELYERFEEQHIERAYKEEELEKALKDCNFKLVGKFDSYSNNSVFKESERIV YVVSK >Mature_244_residues AYGEFANIYDKLIYEDINYDLVGNRIIELCKENNIKYEDYLDLACGTGNVSINVATYFKNTYAVDLSDDMLNVAFDKFKK NKIKAKIICQDMCELSLNHKFDLITSVLDSTNYLTEYDELISYFNRVHEHLKDDGIFIFDINSYYKLSTILGNNIYTYNS DDVFYTWENVFEEDVLNMFLTFFVKSKEELYERFEEQHIERAYKEEELEKALKDCNFKLVGKFDSYSNNSVFKESERIVY VVSK
Specific function: May be a S-adenosyl-L-methionine (SAM)-dependent methyltransferase [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 29024; Mature: 28893
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYGEFANIYDKLIYEDINYDLVGNRIIELCKENNIKYEDYLDLACGTGNVSINVATYFK CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHEEEECCCCEEEEEEEEEC NTYAVDLSDDMLNVAFDKFKKNKIKAKIICQDMCELSLNHKFDLITSVLDSTNYLTEYDE CEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHH LISYFNRVHEHLKDDGIFIFDINSYYKLSTILGNNIYTYNSDDVFYTWENVFEEDVLNMF HHHHHHHHHHHHCCCCEEEEECCCCEEEHEECCCCEEEECCCCEEEEHHHHHHHHHHHHH LTFFVKSKEELYERFEEQHIERAYKEEELEKALKDCNFKLVGKFDSYSNNSVFKESERIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEECCCCEE YVVSK EEEEC >Mature Secondary Structure AYGEFANIYDKLIYEDINYDLVGNRIIELCKENNIKYEDYLDLACGTGNVSINVATYFK CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHEEEECCCCEEEEEEEEEC NTYAVDLSDDMLNVAFDKFKKNKIKAKIICQDMCELSLNHKFDLITSVLDSTNYLTEYDE CEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHH LISYFNRVHEHLKDDGIFIFDINSYYKLSTILGNNIYTYNSDDVFYTWENVFEEDVLNMF HHHHHHHHHHHHCCCCEEEEECCCCEEEHEECCCCEEEECCCCEEEEHHHHHHHHHHHHH LTFFVKSKEELYERFEEQHIERAYKEEELEKALKDCNFKLVGKFDSYSNNSVFKESERIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEECCCCEE YVVSK EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 7968523 [H]