| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is purA [H]
Identifier: 187932377
GI number: 187932377
Start: 3773452
End: 3774738
Strand: Reverse
Name: purA [H]
Synonym: CLL_A3576
Alternate gene names: 187932377
Gene position: 3774738-3773452 (Counterclockwise)
Preceding gene: 187934225
Following gene: 187934966
Centisome position: 99.33
GC content: 31.55
Gene sequence:
>1287_bases ATGTCAGCATTTATTGTTTTAGGAGCCCAATGGGGAGATGAAGGAAAAGGAAAGATGACAGATTATTTAGCGGAAGAGGC TGAAGTTGTTGTTAGATTTCAAGGAGGTAATAATGCTGGTCATACTGTAGAAGTTGGAGATAAGCAATATAAATTGCACT TAATTCCATCAGGAATACTATATGATGATAAATTAAATGTTATTGGAAATGGAGTAGTAGTAGATCCTAAAGCTCTATTT GAAGAAATAAATTATTTAGAAGGTGTTGGAGTTAATGTTACACCAGAAAAATTAATCATAAGTGATAGAGCACAACTTAT AATGCCATATCATAAAACACTAGATGTTTTAAAAGAAAAAGCAAGAGGTAAAAATGATATAGGAACTACAGGAAAGGGCA TAGGTCCATGTTACACAGACAAATTTGAAAGATGTGGAATTAGAGTTTGTGACCTTATGCATGAAGATGTTTTTAAAGAA AAATTAGAAGAAAATATAAGAATGAAAAATGAGTATATTACTAAGGTATTAGGTGGAGAGCCTTTAAGTTTTAGTGAAAT ATTAAATGAATATTTAGAATTTGCAAAGAAATTAAGACCTTTTGTTCAAGATACTTCAGTTAAGGTTTATAACAATATTA AAGAAAATAAAACTGTACTATTTGAAGGTGCACAAGGTATGCTACTAGATATAGATTACGGAACATATCCTTATGTTACA TCATCTAATACAACAGCTGGTGGTGTATGTAGTGGTATAGGTATTGGACCTAACATGGTAACTAATGCAGTAGGAATAAC AAAAGCATATACTACAAGAGTTGGTAAAGGACCATTCCCAACAGAATTAGTTGATGAAACTGGAGATTGGATAAGAGAAA AAGGTCATGAATATGGAGTAACAACAGGAAGATCAAGAAGATGTGGTTGGTTAGACTTAGTTATAGTTAAAACCGCTGCA AGAGTAAGTGGATTGACTTCATTAGCTGTTACTAAGATAGATACATTAGCAGGATTAGAAAAATTAAAAGTATGTGTAGG ATATAAATTTGATGGTAAAGTTATAGATTATTTCCCAGCAAGTTTAGAAGATCTAGCTAAATGCGAACCAGTATATGAAG AATTTGACGGTTGGGATGATAGTGTAGCAGAAGCTAGAACATATGAAGAACTACCTGAAAATGCTAAGAAATACTTAAAT AGAATAGCTGAATTTACAGATACTAAGATTTCTATAATAGGTGTTGGACCAAAGAGAGAACAAACTATAAGAATAGATAG TATATAA
Upstream 100 bases:
>100_bases CTTTGCTAATATTTAAAAGGAGAAGTTATTTAAATATTAAATAAACATCCAAATATTTTTATATAAAGCTATTAAAGCTT GTATTTAAGGAGGCAAACAA
Downstream 100 bases:
>100_bases TATTAAGTTTTCATGTTATTGACTTTACTTTTAGTATAAAATATAATTCATAGTAGATAATATTTGTATGAATTGATTTT TGTAAATAAGAAGGTGAAAA
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSAFIVLGAQWGDEGKGKMTDYLAEEAEVVVRFQGGNNAGHTVEVGDKQYKLHLIPSGILYDDKLNVIGNGVVVDPKALF EEINYLEGVGVNVTPEKLIISDRAQLIMPYHKTLDVLKEKARGKNDIGTTGKGIGPCYTDKFERCGIRVCDLMHEDVFKE KLEENIRMKNEYITKVLGGEPLSFSEILNEYLEFAKKLRPFVQDTSVKVYNNIKENKTVLFEGAQGMLLDIDYGTYPYVT SSNTTAGGVCSGIGIGPNMVTNAVGITKAYTTRVGKGPFPTELVDETGDWIREKGHEYGVTTGRSRRCGWLDLVIVKTAA RVSGLTSLAVTKIDTLAGLEKLKVCVGYKFDGKVIDYFPASLEDLAKCEPVYEEFDGWDDSVAEARTYEELPENAKKYLN RIAEFTDTKISIIGVGPKREQTIRIDSI
Sequences:
>Translated_428_residues MSAFIVLGAQWGDEGKGKMTDYLAEEAEVVVRFQGGNNAGHTVEVGDKQYKLHLIPSGILYDDKLNVIGNGVVVDPKALF EEINYLEGVGVNVTPEKLIISDRAQLIMPYHKTLDVLKEKARGKNDIGTTGKGIGPCYTDKFERCGIRVCDLMHEDVFKE KLEENIRMKNEYITKVLGGEPLSFSEILNEYLEFAKKLRPFVQDTSVKVYNNIKENKTVLFEGAQGMLLDIDYGTYPYVT SSNTTAGGVCSGIGIGPNMVTNAVGITKAYTTRVGKGPFPTELVDETGDWIREKGHEYGVTTGRSRRCGWLDLVIVKTAA RVSGLTSLAVTKIDTLAGLEKLKVCVGYKFDGKVIDYFPASLEDLAKCEPVYEEFDGWDDSVAEARTYEELPENAKKYLN RIAEFTDTKISIIGVGPKREQTIRIDSI >Mature_427_residues SAFIVLGAQWGDEGKGKMTDYLAEEAEVVVRFQGGNNAGHTVEVGDKQYKLHLIPSGILYDDKLNVIGNGVVVDPKALFE EINYLEGVGVNVTPEKLIISDRAQLIMPYHKTLDVLKEKARGKNDIGTTGKGIGPCYTDKFERCGIRVCDLMHEDVFKEK LEENIRMKNEYITKVLGGEPLSFSEILNEYLEFAKKLRPFVQDTSVKVYNNIKENKTVLFEGAQGMLLDIDYGTYPYVTS SNTTAGGVCSGIGIGPNMVTNAVGITKAYTTRVGKGPFPTELVDETGDWIREKGHEYGVTTGRSRRCGWLDLVIVKTAAR VSGLTSLAVTKIDTLAGLEKLKVCVGYKFDGKVIDYFPASLEDLAKCEPVYEEFDGWDDSVAEARTYEELPENAKKYLNR IAEFTDTKISIIGVGPKREQTIRIDSI
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=427, Percent_Identity=46.8384074941452, Blast_Score=378, Evalue=1e-105, Organism=Homo sapiens, GI34577063, Length=429, Percent_Identity=45.4545454545455, Blast_Score=364, Evalue=1e-101, Organism=Homo sapiens, GI40316944, Length=398, Percent_Identity=45.4773869346734, Blast_Score=337, Evalue=1e-92, Organism=Escherichia coli, GI1790620, Length=420, Percent_Identity=47.8571428571429, Blast_Score=397, Evalue=1e-112, Organism=Caenorhabditis elegans, GI25146553, Length=427, Percent_Identity=44.9648711943794, Blast_Score=352, Evalue=1e-97, Organism=Caenorhabditis elegans, GI25146555, Length=427, Percent_Identity=44.9648711943794, Blast_Score=352, Evalue=2e-97, Organism=Saccharomyces cerevisiae, GI6324109, Length=427, Percent_Identity=43.559718969555, Blast_Score=368, Evalue=1e-102, Organism=Drosophila melanogaster, GI21356033, Length=423, Percent_Identity=42.789598108747, Blast_Score=364, Evalue=1e-101,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 47393; Mature: 47261
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFIVLGAQWGDEGKGKMTDYLAEEAEVVVRFQGGNNAGHTVEVGDKQYKLHLIPSGIL CCEEEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCCCCCEEEECCCEEEEEEECCCEE YDDKLNVIGNGVVVDPKALFEEINYLEGVGVNVTPEKLIISDRAQLIMPYHKTLDVLKEK ECCCCCEEECCEEECHHHHHHHHHHHCCCCCCCCHHHHEECCCHHEEECHHHHHHHHHHH ARGKNDIGTTGKGIGPCYTDKFERCGIRVCDLMHEDVFKEKLEENIRMKNEYITKVLGGE HCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLSFSEILNEYLEFAKKLRPFVQDTSVKVYNNIKENKTVLFEGAQGMLLDIDYGTYPYVT CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCCEEEEECCCCCCEEE SSNTTAGGVCSGIGIGPNMVTNAVGITKAYTTRVGKGPFPTELVDETGDWIREKGHEYGV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC TTGRSRRCGWLDLVIVKTAARVSGLTSLAVTKIDTLAGLEKLKVCVGYKFDGKVIDYFPA CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCC SLEDLAKCEPVYEEFDGWDDSVAEARTYEELPENAKKYLNRIAEFTDTKISIIGVGPKRE CHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC QTIRIDSI CEEEECCC >Mature Secondary Structure SAFIVLGAQWGDEGKGKMTDYLAEEAEVVVRFQGGNNAGHTVEVGDKQYKLHLIPSGIL CEEEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCCCCCEEEECCCEEEEEEECCCEE YDDKLNVIGNGVVVDPKALFEEINYLEGVGVNVTPEKLIISDRAQLIMPYHKTLDVLKEK ECCCCCEEECCEEECHHHHHHHHHHHCCCCCCCCHHHHEECCCHHEEECHHHHHHHHHHH ARGKNDIGTTGKGIGPCYTDKFERCGIRVCDLMHEDVFKEKLEENIRMKNEYITKVLGGE HCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLSFSEILNEYLEFAKKLRPFVQDTSVKVYNNIKENKTVLFEGAQGMLLDIDYGTYPYVT CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCCEEEEECCCCCCEEE SSNTTAGGVCSGIGIGPNMVTNAVGITKAYTTRVGKGPFPTELVDETGDWIREKGHEYGV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC TTGRSRRCGWLDLVIVKTAARVSGLTSLAVTKIDTLAGLEKLKVCVGYKFDGKVIDYFPA CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCC SLEDLAKCEPVYEEFDGWDDSVAEARTYEELPENAKKYLNRIAEFTDTKISIIGVGPKRE CHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC QTIRIDSI CEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA