| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is spoIIM [H]
Identifier: 187932329
GI number: 187932329
Start: 2460777
End: 2461409
Strand: Reverse
Name: spoIIM [H]
Synonym: CLL_A2369
Alternate gene names: 187932329
Gene position: 2461409-2460777 (Counterclockwise)
Preceding gene: 187935332
Following gene: 187933384
Centisome position: 64.77
GC content: 25.59
Gene sequence:
>633_bases GTGGTGAATTATATGGTGAATAAGCTTGGTCAAACCTTTAAAGATAAAAAAGTATATTTCTTCATGGTATTAATAATGTT TTGCATTGGAATATCTTTTGGACTTTATGTAGTAAAGTACATGAGCGAATCTAACAGAAATGATTTGTTAAGTTATTTTT CAAGTTTTACATCTTCGATAGGGGACACGCCTATTAATTATGAAAATTTGTTAATTAATGTTATAAAAAAGAATATGTTG TTAATTATACCTATATTCATGTTTGGTTTTACTTTTTTTGGAATGCCGTTCATATTAGTTTTAGATATGTTTAAAGGGTT TACGTTAGGATATACGTTTTCGTTTATACTAACAACTTTTCAGGGCAAAGGTATTGGATTAGCATTAGTATCTGTAATTC CTCAAAATTTAATTTATATTCCTTGTTTTATAGCATTAAGTGTTATAGCATTAGCTATGTCAACTCAAAAATTTAAAAGT AAGTTTTTTAAAAGAGCAAATTTGAATGATCCATTTTTTAATTCTTTAGGAAATAAGTTGATTGTAATTTTAGGATTCTT TGTATTTGCAGCAATTATAGAAACTTATGTGTCACCTAATTTTATAAAATTTGTGGTTACTAAATTTTATTAG
Upstream 100 bases:
>100_bases GAAATTTTAATATTTTAATTAACATATATTTTCTTAAGTACTAAGAATAATATGGAAATATTAAACATAGTATAAAGTAG AGTAACTCAAGGAGGAATAA
Downstream 100 bases:
>100_bases TTTTATAATTAAAAAACATATATAGAAAATTATAAACTTAAGATATAAGTTTTAATTAAAAAGGAAAAATGATAATTTTG TCGAATATTAATTCATAATC
Product: stage II sporulation protein M
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MVNYMVNKLGQTFKDKKVYFFMVLIMFCIGISFGLYVVKYMSESNRNDLLSYFSSFTSSIGDTPINYENLLINVIKKNML LIIPIFMFGFTFFGMPFILVLDMFKGFTLGYTFSFILTTFQGKGIGLALVSVIPQNLIYIPCFIALSVIALAMSTQKFKS KFFKRANLNDPFFNSLGNKLIVILGFFVFAAIIETYVSPNFIKFVVTKFY
Sequences:
>Translated_210_residues MVNYMVNKLGQTFKDKKVYFFMVLIMFCIGISFGLYVVKYMSESNRNDLLSYFSSFTSSIGDTPINYENLLINVIKKNML LIIPIFMFGFTFFGMPFILVLDMFKGFTLGYTFSFILTTFQGKGIGLALVSVIPQNLIYIPCFIALSVIALAMSTQKFKS KFFKRANLNDPFFNSLGNKLIVILGFFVFAAIIETYVSPNFIKFVVTKFY >Mature_210_residues MVNYMVNKLGQTFKDKKVYFFMVLIMFCIGISFGLYVVKYMSESNRNDLLSYFSSFTSSIGDTPINYENLLINVIKKNML LIIPIFMFGFTFFGMPFILVLDMFKGFTLGYTFSFILTTFQGKGIGLALVSVIPQNLIYIPCFIALSVIALAMSTQKFKS KFFKRANLNDPFFNSLGNKLIVILGFFVFAAIIETYVSPNFIKFVVTKFY
Specific function: Required for complete septum migration and engulfment of the forespore compartment during sporulation [H]
COG id: COG1300
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002798 - InterPro: IPR014196 [H]
Pfam domain/function: PF01944 DUF95 [H]
EC number: NA
Molecular weight: Translated: 24035; Mature: 24035
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNYMVNKLGQTFKDKKVYFFMVLIMFCIGISFGLYVVKYMSESNRNDLLSYFSSFTSSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GDTPINYENLLINVIKKNMLLIIPIFMFGFTFFGMPFILVLDMFKGFTLGYTFSFILTTF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH QGKGIGLALVSVIPQNLIYIPCFIALSVIALAMSTQKFKSKFFKRANLNDPFFNSLGNKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IVILGFFVFAAIIETYVSPNFIKFVVTKFY HHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MVNYMVNKLGQTFKDKKVYFFMVLIMFCIGISFGLYVVKYMSESNRNDLLSYFSSFTSSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GDTPINYENLLINVIKKNMLLIIPIFMFGFTFFGMPFILVLDMFKGFTLGYTFSFILTTF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH QGKGIGLALVSVIPQNLIYIPCFIALSVIALAMSTQKFKSKFFKRANLNDPFFNSLGNKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IVILGFFVFAAIIETYVSPNFIKFVVTKFY HHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501064; 8969508; 9384377 [H]