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The map label for this gene is yfjD [H]

Identifier: 187918075

GI number: 187918075

Start: 201605

End: 202846

Strand: Direct

Name: yfjD [H]

Synonym: BH0202

Alternate gene names: 187918075

Gene position: 201605-202846 (Clockwise)

Preceding gene: 187918072

Following gene: 187918076

Centisome position: 21.86

GC content: 28.82

Gene sequence:

>1242_bases
ATGTTAGAATTAATAATCATATTAACATTTATAATACTATCGGCAATTTTTTCAGCATCAGAAACAGCCTACACATCATT
AAGCCTAATCCAACTTCAAGACATAAAGAAAAAAGGCAAGCTAGGAACAGTAGTATACAACTTAGCCCAAGATCCATCAA
AACTCGTAACAACAATTCTCATTGGGAATAATATTGCAAATATAGCAGCAAGTGCCCTTACAACAAAATTTGTTCTAGAT
AAATATGGAAACAATGCACTAGCATTATCAACTGGAATCATAACAATAATAGTGCTTATATTCTCAGAAATATTTCCTAA
ACAGGTTGCGATTTTAAATAACGAGAGCATAGTTTTATCAACCTCGATCTTACTCAAGATATTAACAATCATATTCACAC
CAGCAATATACGTAATTAATGGAATAGTCAAAATTTTACTAAGCCTATGCAAAATAAAATCAAGTCAAAAAATGACTAAA
GATAGCATAAAAAACATGTTATTTTTAGCCGAAAAATTAGGAATATTAGAAAATGACGACAGAATATTCATGCAAAAAAT
GTTAAACATAGGAGAAGTCAGAGCCTCTGAAGTTATGACACACCGAACAGAAGTATTCTCACTATCAAGCGCATCAAAAT
TAAAAGATAAAATTAAATTAATTAAAAAAGAAGGATATTCCAGAATTCCCGTATACAAAGGTCAAAATAGAGAACAAATA
ATAGGAATTTTAATAACCAAAGACCTAATTGAAATAAGTAAAAAAAAACTTGAAAAAAACATTATTAAATTTGTAAAACC
TGCTGTTTTTGTACAGCAAAACAAGAGGATAAAAGATATACTAGATATCATGAGACAAAAACAAAAAATAATGGCAATTG
TTATTGACGAATATGGAGGATTTTCAGGAATACTTACAATAGAAGATATAGTAGAGAAGATCTTTGGTGCAATATTTGAT
GAATATGATTTCGAAGAAAAAAAACAACTTATTACTAAAAAAGATGAAAACATTTACCTAATATCAGGCGAGACCACATT
TGATGAGATTGAGGAAACAGTTGGAATAAAAATTCAACATAAAGATTACATAAACACAATTGGAGGATACATCATGGATT
TACTTGATAAAATACCCACGAGCGGAGAACAGGTTAATACAGAACATGGGGAATATTTAATAGAGGAAATACAGAACCAC
AAAATCAAAAAAATAACATTTAAAAAATTTGAAAAGGAATAA

Upstream 100 bases:

>100_bases
TCGGCGCCTTGTAAGCCTTAAGTAAAAGCCAGCATAATTTTTTTTCCAAAGACAAACAAAATTAAAGAAAATGATTTAAA
GATAAACTAAAATAATAATT

Downstream 100 bases:

>100_bases
AAATGAATAAAAATACTTGGGACATGATCTTGTATTACTTAAAGTCCAACTTAAACACAAAATACGCCCTAAGAAAAATT
AAAACATAAAGGACTTAAAA

Product: magnesium and cobalt efflux protein CorC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MLELIIILTFIILSAIFSASETAYTSLSLIQLQDIKKKGKLGTVVYNLAQDPSKLVTTILIGNNIANIAASALTTKFVLD
KYGNNALALSTGIITIIVLIFSEIFPKQVAILNNESIVLSTSILLKILTIIFTPAIYVINGIVKILLSLCKIKSSQKMTK
DSIKNMLFLAEKLGILENDDRIFMQKMLNIGEVRASEVMTHRTEVFSLSSASKLKDKIKLIKKEGYSRIPVYKGQNREQI
IGILITKDLIEISKKKLEKNIIKFVKPAVFVQQNKRIKDILDIMRQKQKIMAIVIDEYGGFSGILTIEDIVEKIFGAIFD
EYDFEEKKQLITKKDENIYLISGETTFDEIEETVGIKIQHKDYINTIGGYIMDLLDKIPTSGEQVNTEHGEYLIEEIQNH
KIKKITFKKFEKE

Sequences:

>Translated_413_residues
MLELIIILTFIILSAIFSASETAYTSLSLIQLQDIKKKGKLGTVVYNLAQDPSKLVTTILIGNNIANIAASALTTKFVLD
KYGNNALALSTGIITIIVLIFSEIFPKQVAILNNESIVLSTSILLKILTIIFTPAIYVINGIVKILLSLCKIKSSQKMTK
DSIKNMLFLAEKLGILENDDRIFMQKMLNIGEVRASEVMTHRTEVFSLSSASKLKDKIKLIKKEGYSRIPVYKGQNREQI
IGILITKDLIEISKKKLEKNIIKFVKPAVFVQQNKRIKDILDIMRQKQKIMAIVIDEYGGFSGILTIEDIVEKIFGAIFD
EYDFEEKKQLITKKDENIYLISGETTFDEIEETVGIKIQHKDYINTIGGYIMDLLDKIPTSGEQVNTEHGEYLIEEIQNH
KIKKITFKKFEKE
>Mature_413_residues
MLELIIILTFIILSAIFSASETAYTSLSLIQLQDIKKKGKLGTVVYNLAQDPSKLVTTILIGNNIANIAASALTTKFVLD
KYGNNALALSTGIITIIVLIFSEIFPKQVAILNNESIVLSTSILLKILTIIFTPAIYVINGIVKILLSLCKIKSSQKMTK
DSIKNMLFLAEKLGILENDDRIFMQKMLNIGEVRASEVMTHRTEVFSLSSASKLKDKIKLIKKEGYSRIPVYKGQNREQI
IGILITKDLIEISKKKLEKNIIKFVKPAVFVQQNKRIKDILDIMRQKQKIMAIVIDEYGGFSGILTIEDIVEKIFGAIFD
EYDFEEKKQLITKKDENIYLISGETTFDEIEETVGIKIQHKDYINTIGGYIMDLLDKIPTSGEQVNTEHGEYLIEEIQNH
KIKKITFKKFEKE

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=352, Percent_Identity=25.2840909090909, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI40068055, Length=342, Percent_Identity=23.9766081871345, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI40068053, Length=344, Percent_Identity=24.1279069767442, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI94681046, Length=328, Percent_Identity=23.1707317073171, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI145693175, Length=400, Percent_Identity=26.5, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI1790664, Length=425, Percent_Identity=23.5294117647059, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786879, Length=269, Percent_Identity=25.2788104089219, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87082033, Length=241, Percent_Identity=22.4066390041494, Blast_Score=97, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71980512, Length=353, Percent_Identity=27.1954674220963, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17539402, Length=347, Percent_Identity=24.7838616714697, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6324512, Length=292, Percent_Identity=26.7123287671233, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46736; Mature: 46736

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELIIILTFIILSAIFSASETAYTSLSLIQLQDIKKKGKLGTVVYNLAQDPSKLVTTIL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
IGNNIANIAASALTTKFVLDKYGNNALALSTGIITIIVLIFSEIFPKQVAILNNESIVLS
CCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCHHHEEEECCCCEEEH
TSILLKILTIIFTPAIYVINGIVKILLSLCKIKSSQKMTKDSIKNMLFLAEKLGILENDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
RIFMQKMLNIGEVRASEVMTHRTEVFSLSSASKLKDKIKLIKKEGYSRIPVYKGQNREQI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEECCCCHHHH
IGILITKDLIEISKKKLEKNIIKFVKPAVFVQQNKRIKDILDIMRQKQKIMAIVIDEYGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCC
FSGILTIEDIVEKIFGAIFDEYDFEEKKQLITKKDENIYLISGETTFDEIEETVGIKIQH
CCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCEEEC
KDYINTIGGYIMDLLDKIPTSGEQVNTEHGEYLIEEIQNHKIKKITFKKFEKE
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLELIIILTFIILSAIFSASETAYTSLSLIQLQDIKKKGKLGTVVYNLAQDPSKLVTTIL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
IGNNIANIAASALTTKFVLDKYGNNALALSTGIITIIVLIFSEIFPKQVAILNNESIVLS
CCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCHHHEEEECCCCEEEH
TSILLKILTIIFTPAIYVINGIVKILLSLCKIKSSQKMTKDSIKNMLFLAEKLGILENDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
RIFMQKMLNIGEVRASEVMTHRTEVFSLSSASKLKDKIKLIKKEGYSRIPVYKGQNREQI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEECCCCHHHH
IGILITKDLIEISKKKLEKNIIKFVKPAVFVQQNKRIKDILDIMRQKQKIMAIVIDEYGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCC
FSGILTIEDIVEKIFGAIFDEYDFEEKKQLITKKDENIYLISGETTFDEIEETVGIKIQH
CCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCEEEC
KDYINTIGGYIMDLLDKIPTSGEQVNTEHGEYLIEEIQNHKIKKITFKKFEKE
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]