| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is flgK [H]
Identifier: 187918055
GI number: 187918055
Start: 182193
End: 184076
Strand: Direct
Name: flgK [H]
Synonym: BH0181
Alternate gene names: 187918055
Gene position: 182193-184076 (Clockwise)
Preceding gene: 187918054
Following gene: 187918056
Centisome position: 19.75
GC content: 33.23
Gene sequence:
>1884_bases ATGGATTCAACATTCTCAGGAATAGAAATTGGAAAGAAAAGTTTATTTGCACACAAAGATGCTATGAACACAATTGGTCA CAACCTAACTAACACCTCAAAACCCGGGTATTCAAGACAGAGAGTTATAATGAAAACTGAAATGCCAATTTATGCTCCTC AATTAAATAGAGCAAACAAAGCCGGTCAACTGGGTCAAGGAATGATGGTGCAATCCATAGAGCGAATAAGAGATGATTTA CTTGACATAAGAATAGCTGAAGAATCGCATCGTCTTGGCTATTGGAATTCGAAAGATAAATTTATTTCTCTGCTTGAAAA CATATATAATGAACCTGAAGACCAATCAATCAGAAAAAGATTAAATGATTTCTGGGATAGCTGGCAAGATTTATCAAGAC AGCCTCAAGGATTGGCTGAAAGAAATATTACCTTAGAACGCGGACAAGCTTTCGCAGAAATAGTAAGAAGTAGATTCCAC TCTCTTAATCGAATATACACAATGGCAAATGATGAGGTAAAAATTACAATTGAAGAGATAAATAACTATCTTAGAAATAT CAGTGATCTCAATAGGCAAATTGCAAAAGCAATCGCCATGAAAGATCAGCCAAATGATTTAATGGATGAACGAGATTTAA TAGTTGATAAACTAAGCAATTTAATTAGTATCTCCATAGAAAATAAGCGCGATCCCAATGAATTTTTAATTCACACAGAA GGTAAACATCTCATTCAAGGTGCAATCGCAAATGAATTCATATTGGAAGCAGCCAATGGGCCCACAAGAACCAAATGGAA TATTTTATGGAATAATAGAGAACCTGCCAATATTAATACGGGAAAACTAGGAGCTCTTATTAATGTAAGAGATAACGAAA TTAAAAACGAGATTAATGAAATAGATAACATGGCAATTAATATCACAGAGCTTGTAAATGAAGTTCATATCTCAGGACAC GGTCTTGATCAAAAAAGTGGGAGAATTTTCTTCGATCAAGAATACAAGCTAACCGATGAGAGTGGACGATATGACAGCAA TGGAGATGGTAAGTTTGATTCTGTTCATATATTCAAAATAAACAGTACAAATGAAATTTTCCCAGAAGAAAAGCTAGGAT TTTCAGGAATACTAAGATTTCAAGCAATCAATAAAAATGATTTCATAGAAATACCCTACCTTACAACAGACACAGTTCAA GATATAATAAATAAAATAAATAACTCCAACTCACAAGTCACTGCAAGAATCAATGCAGAAGGAAAACTTGAAATTAAGGC AATTAAAGAAGAAGAGAGAGATAGTGCTATCTTTAGAATTAGATACATTGAAGATTCTGGACTATTTTTAACAACTTACA CAGGCATTTTAAATGCATCGGGAGCTGAGGGTGCTTATAACTATCAAGACGTTAATACTACTAACCAACTAATAAACACA GCTAGCTACTCAATATCTCCTCTAAAAAATCCAGCCGCATGGCTTAAAGTATCTAAAGAAATTTCAGAAGATCCATCAAA GATTGCATCAGGAATTAGAACTCCAACAAACAATATGCCTATTGGAAACAATGAAACAGCATTACGTATTGCATCTTTTG TAAACTCACAAATCATGATTGGAAAGAACGTAACACTAAACGACTACTTCGCAAACACAACTTCCAATATTGCAATAAAA GGACAAATCGCAGAAATTACAAAAAATAGCCAAGAACAAATACTTAGAAGTCTAACTGATTTAAGATTATCAATATCTGG TGTAAATAAAGATGAAGAACTAGCAAACATGATAGAATTTCAACAATCATTTATTGCCGCAAGTAAATTCATCACCGTTT CTGCAGAATTAATAGATACAATCATAAATAAAATGGGAGTATAA
Upstream 100 bases:
>100_bases AAATATCACCTATAAAAACCCTTATGGGCCAAAAAGCGGAAACTTAAATGAAGCATCCGTTTTAATAAACAAAAAACTTT AATTACTCAAGGAGTTTAAA
Downstream 100 bases:
>100_bases TATATGATAAACAGAGTAAGTCATCCTTTGACATATGATAATTTAAAAGCATCTTCAACAGATAAGGAAGTAAAAATAAC AAGGCTTTTGGAAAGTCTAT
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANKAGQLGQGMMVQSIERIRDDL LDIRIAEESHRLGYWNSKDKFISLLENIYNEPEDQSIRKRLNDFWDSWQDLSRQPQGLAERNITLERGQAFAEIVRSRFH SLNRIYTMANDEVKITIEEINNYLRNISDLNRQIAKAIAMKDQPNDLMDERDLIVDKLSNLISISIENKRDPNEFLIHTE GKHLIQGAIANEFILEAANGPTRTKWNILWNNREPANINTGKLGALINVRDNEIKNEINEIDNMAINITELVNEVHISGH GLDQKSGRIFFDQEYKLTDESGRYDSNGDGKFDSVHIFKINSTNEIFPEEKLGFSGILRFQAINKNDFIEIPYLTTDTVQ DIINKINNSNSQVTARINAEGKLEIKAIKEEERDSAIFRIRYIEDSGLFLTTYTGILNASGAEGAYNYQDVNTTNQLINT ASYSISPLKNPAAWLKVSKEISEDPSKIASGIRTPTNNMPIGNNETALRIASFVNSQIMIGKNVTLNDYFANTTSNIAIK GQIAEITKNSQEQILRSLTDLRLSISGVNKDEELANMIEFQQSFIAASKFITVSAELIDTIINKMGV
Sequences:
>Translated_627_residues MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANKAGQLGQGMMVQSIERIRDDL LDIRIAEESHRLGYWNSKDKFISLLENIYNEPEDQSIRKRLNDFWDSWQDLSRQPQGLAERNITLERGQAFAEIVRSRFH SLNRIYTMANDEVKITIEEINNYLRNISDLNRQIAKAIAMKDQPNDLMDERDLIVDKLSNLISISIENKRDPNEFLIHTE GKHLIQGAIANEFILEAANGPTRTKWNILWNNREPANINTGKLGALINVRDNEIKNEINEIDNMAINITELVNEVHISGH GLDQKSGRIFFDQEYKLTDESGRYDSNGDGKFDSVHIFKINSTNEIFPEEKLGFSGILRFQAINKNDFIEIPYLTTDTVQ DIINKINNSNSQVTARINAEGKLEIKAIKEEERDSAIFRIRYIEDSGLFLTTYTGILNASGAEGAYNYQDVNTTNQLINT ASYSISPLKNPAAWLKVSKEISEDPSKIASGIRTPTNNMPIGNNETALRIASFVNSQIMIGKNVTLNDYFANTTSNIAIK GQIAEITKNSQEQILRSLTDLRLSISGVNKDEELANMIEFQQSFIAASKFITVSAELIDTIINKMGV >Mature_627_residues MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANKAGQLGQGMMVQSIERIRDDL LDIRIAEESHRLGYWNSKDKFISLLENIYNEPEDQSIRKRLNDFWDSWQDLSRQPQGLAERNITLERGQAFAEIVRSRFH SLNRIYTMANDEVKITIEEINNYLRNISDLNRQIAKAIAMKDQPNDLMDERDLIVDKLSNLISISIENKRDPNEFLIHTE GKHLIQGAIANEFILEAANGPTRTKWNILWNNREPANINTGKLGALINVRDNEIKNEINEIDNMAINITELVNEVHISGH GLDQKSGRIFFDQEYKLTDESGRYDSNGDGKFDSVHIFKINSTNEIFPEEKLGFSGILRFQAINKNDFIEIPYLTTDTVQ DIINKINNSNSQVTARINAEGKLEIKAIKEEERDSAIFRIRYIEDSGLFLTTYTGILNASGAEGAYNYQDVNTTNQLINT ASYSISPLKNPAAWLKVSKEISEDPSKIASGIRTPTNNMPIGNNETALRIASFVNSQIMIGKNVTLNDYFANTTSNIAIK GQIAEITKNSQEQILRSLTDLRLSISGVNKDEELANMIEFQQSFIAASKFITVSAELIDTIINKMGV
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=328, Percent_Identity=22.8658536585366, Blast_Score=100, Evalue=5e-22,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR002371 - InterPro: IPR010810 [H]
Pfam domain/function: PF06429 DUF1078; PF07196 Flagellin_IN [H]
EC number: NA
Molecular weight: Translated: 70896; Mature: 70896
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANK CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCC AGQLGQGMMVQSIERIRDDLLDIRIAEESHRLGYWNSKDKFISLLENIYNEPEDQSIRKR CCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH LNDFWDSWQDLSRQPQGLAERNITLERGQAFAEIVRSRFHSLNRIYTMANDEVKITIEEI HHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEHHHH NNYLRNISDLNRQIAKAIAMKDQPNDLMDERDLIVDKLSNLISISIENKRDPNEFLIHTE HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECC GKHLIQGAIANEFILEAANGPTRTKWNILWNNREPANINTGKLGALINVRDNEIKNEINE CHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHH IDNMAINITELVNEVHISGHGLDQKSGRIFFDQEYKLTDESGRYDSNGDGKFDSVHIFKI HHCCEEEHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCEEEEEEE NSTNEIFPEEKLGFSGILRFQAINKNDFIEIPYLTTDTVQDIINKINNSNSQVTARINAE CCCCCCCCCHHCCHHHEEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCC GKLEIKAIKEEERDSAIFRIRYIEDSGLFLTTYTGILNASGAEGAYNYQDVNTTNQLINT CEEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHH ASYSISPLKNPAAWLKVSKEISEDPSKIASGIRTPTNNMPIGNNETALRIASFVNSQIMI CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE GKNVTLNDYFANTTSNIAIKGQIAEITKNSQEQILRSLTDLRLSISGVNKDEELANMIEF CCCCEECCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHH QQSFIAASKFITVSAELIDTIINKMGV HHHHHHHHHHEEEEHHHHHHHHHHHCC >Mature Secondary Structure MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANK CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCC AGQLGQGMMVQSIERIRDDLLDIRIAEESHRLGYWNSKDKFISLLENIYNEPEDQSIRKR CCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH LNDFWDSWQDLSRQPQGLAERNITLERGQAFAEIVRSRFHSLNRIYTMANDEVKITIEEI HHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEHHHH NNYLRNISDLNRQIAKAIAMKDQPNDLMDERDLIVDKLSNLISISIENKRDPNEFLIHTE HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECC GKHLIQGAIANEFILEAANGPTRTKWNILWNNREPANINTGKLGALINVRDNEIKNEINE CHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHH IDNMAINITELVNEVHISGHGLDQKSGRIFFDQEYKLTDESGRYDSNGDGKFDSVHIFKI HHCCEEEHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCEEEEEEE NSTNEIFPEEKLGFSGILRFQAINKNDFIEIPYLTTDTVQDIINKINNSNSQVTARINAE CCCCCCCCCHHCCHHHEEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCC GKLEIKAIKEEERDSAIFRIRYIEDSGLFLTTYTGILNASGAEGAYNYQDVNTTNQLINT CEEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHH ASYSISPLKNPAAWLKVSKEISEDPSKIASGIRTPTNNMPIGNNETALRIASFVNSQIMI CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE GKNVTLNDYFANTTSNIAIKGQIAEITKNSQEQILRSLTDLRLSISGVNKDEELANMIEF CCCCEECCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHH QQSFIAASKFITVSAELIDTIINKMGV HHHHHHHHHHEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]