| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187734178
Identifier: 187734178
GI number: 187734178
Start: 2086943
End: 2087629
Strand: Reverse
Name: 187734178
Synonym: SbBS512_E2298
Alternate gene names: NA
Gene position: 2087629-2086943 (Counterclockwise)
Preceding gene: 187732273
Following gene: 187733474
Centisome position: 45.23
GC content: 43.67
Gene sequence:
>687_bases ATGAGCTTTATGGCTTTTGTAACTTGTTTGACAATTGCATTTATCGCCGGTTTTGCTGTTGCCAGAAAATTGACACTCCG AAAAGTTGCCTCATCGGTAATCATCGCTAAATCGCAACCCGTCCCTTCATCTGCAACTTCCCCTGCCGCTAAGGCGTCGA CAAGGAGCTATATACCGCAGAAAACCTATCGTGACTCTCGTTGGCAAGAGCGAGATGAGTTATTTCAGGGAATGGTTGCC GAAGGTATTTTATTGGAAAGAAAAGAGTGGTTAATCACTCGTTGTGAAAAAATGTATTTCGATAATCTGGAAAAATGGTT TGGACATTATTGTCATATCCATTGCCAGGCCTCTCTGGGGCGCTTGATCAACTTTCCAGAACAACCTGAGTTTAGCGAAG AAGAAAGAAAGCGTTTCTTTGCAATTTATAATGGCATGGCAATGGATTATGTTCTGGTTTCAAAGAAGAACAATAAAAAA GTCTGTGTTATTGAGCTGGATGACCCGAGTCATGAAAGGGCGGATCGCATTATTCGTGACCGTTGGTTGGATACAATTAT GACTCTTGCACGGGTGCCTTTTGTACGAGCTTCTGTCACTAAATTGGAGGAAATTCCTCCGGTCTGGGAGACTCGTGACA AGATTCGCCCATTAGTCGCGGCGACAAAGAGTGAACCGGTGCATTAA
Upstream 100 bases:
>100_bases ACTAACTATATATTGATCGTTGCATTGTTGGCATGTAACACGCTGCAGCGAGTAACATTGGTAATGAAATATAATCAACA TGGATAGGTGAAAATTAATT
Downstream 100 bases:
>100_bases CTAAGTATCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAGCCCGTACCTTCGTACGAGCTCT TCTTTAAAGATGGCGGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQKTYRDSRWQERDELFQGMVA EGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQASLGRLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKK VCVIELDDPSHERADRIIRDRWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPVH
Sequences:
>Translated_228_residues MSFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQKTYRDSRWQERDELFQGMVA EGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQASLGRLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKK VCVIELDDPSHERADRIIRDRWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPVH >Mature_227_residues SFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQKTYRDSRWQERDELFQGMVAE GILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQASLGRLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKKV CVIELDDPSHERADRIIRDRWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26390; Mature: 26259
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHCCCC KTYRDSRWQERDELFQGMVAEGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQASLG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHH RLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKKVCVIELDDPSHERADRIIRD HHCCCCCCCCCCHHHHHHHHHHHCCCHHEEEEEECCCCCEEEEEEECCCCHHHHHHHHHH RWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPVH HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHCCCC KTYRDSRWQERDELFQGMVAEGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQASLG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHH RLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKKVCVIELDDPSHERADRIIRD HHCCCCCCCCCCHHHHHHHHHHHCCCHHEEEEEECCCCCEEEEEEECCCCHHHHHHHHHH RWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPVH HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA