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The map label for this gene is insD1 [C]

Identifier: 187734154

GI number: 187734154

Start: 4070438

End: 4070989

Strand: Reverse

Name: insD1 [C]

Synonym: SbBS512_E4356

Alternate gene names: 187734154

Gene position: 4070989-4070438 (Counterclockwise)

Preceding gene: 187731097

Following gene: 187732883

Centisome position: 88.19

GC content: 55.8

Gene sequence:

>552_bases
GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCA
GTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC
TCCGTATACACCATGTTATCGGAGAGCTGCCCACATATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAA
CTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACC
TGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGT
TCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGG
GCGGTGACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCGGTGATGCTGCCAACTTACTGATTTAG

Upstream 100 bases:

>100_bases
CCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTT
GAATATGGACGGGCAAAAAA

Downstream 100 bases:

>100_bases
TGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGG
TGCGTAACGGCAAAAGCACT

Product: transposase InsD for insertion element IS2A/D/F/H/I/K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAE
LDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVGDAANLLI

Sequences:

>Translated_183_residues
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAE
LDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVGDAANLLI
>Mature_183_residues
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAE
LDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVGDAANLLI

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=175, Percent_Identity=100, Blast_Score=362, Evalue=1e-102,
Organism=Escherichia coli, GI1789424, Length=175, Percent_Identity=100, Blast_Score=362, Evalue=1e-102,
Organism=Escherichia coli, GI1789224, Length=175, Percent_Identity=100, Blast_Score=362, Evalue=1e-102,
Organism=Escherichia coli, GI1788305, Length=175, Percent_Identity=100, Blast_Score=362, Evalue=1e-102,
Organism=Escherichia coli, GI1787669, Length=175, Percent_Identity=100, Blast_Score=362, Evalue=1e-102,
Organism=Escherichia coli, GI1786558, Length=175, Percent_Identity=100, Blast_Score=362, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 20882; Mature: 20882

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHH
GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV
HCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEE
AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVGDAAN
EEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHH
LLI
HCC
>Mature Secondary Structure
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHH
GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV
HCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEE
AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVGDAAN
EEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHH
LLI
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA