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The map label for this gene is ymjC [H]

Identifier: 187733975

GI number: 187733975

Start: 1424746

End: 1425222

Strand: Reverse

Name: ymjC [H]

Synonym: SbBS512_E1562

Alternate gene names: 187733975

Gene position: 1425222-1424746 (Counterclockwise)

Preceding gene: 187731598

Following gene: 187732718

Centisome position: 30.88

GC content: 43.82

Gene sequence:

>477_bases
ATGAAAAATGTACTGATTCTTGGTGCTGGCGGTCAGATAGCCCGCCATGTGATTAATCAACTGGCAGATAAACAAACCAT
TAAACAAACTTTATTTGCCCGTCAGCCAGCAAAAATCCACAAACCCTATCCAACTAATAGCAAGATTATTATGGGAGATG
TACTGAATCATGCAGCACTGAAGCAGGCCATGCAGGGACAGGACGTTGTGTATGCCAACCTTACGGGGGAAGATTTAGAT
ATTCAGGCAAATTCAGTGATCGCTGCGATGAAAGCCTGTGATGTTAAACGTCTGATCTTTGTTCTTTCCCTCGGTATTTA
TGATGAAGTTCCAGGAAAATTTGGCGAATGGAATAATGCAGTTATTGGTGAACCCCTAAAACCATTCCGCAGGGCTGCGG
ATGCAATTGAGGCTTCTGGACTGGAATATACAATTCTTCGCCCTGAAGTGGTCAACAAAAACTGGCCACCGAGTTAG

Upstream 100 bases:

>100_bases
ATTATGAACTGTATGACAAACCGGAAGCAGTTCAGGAGGCGCTGGAAAAAGTTATTCCTTTTTTCAACCCCCATCTGGGA
TAAGTTTCATGAGAAATATT

Downstream 100 bases:

>100_bases
AGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGTAACCCACCACCGGCATCCATTCGTTCTTCAGACTCCTGAAGAA
GCGTTCCATTGGGCTGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALKQAMQGQDVVYANLTGEDLD
IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPEVVNKNWPPS

Sequences:

>Translated_158_residues
MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALKQAMQGQDVVYANLTGEDLD
IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPEVVNKNWPPS
>Mature_158_residues
MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALKQAMQGQDVVYANLTGEDLD
IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPEVVNKNWPPS

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17345; Mature: 17345

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAAL
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHH
KQAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNNA
HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
VIGEPLKPFRRAADAIEASGLEYTILRPEVVNKNWPPS
CCCCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCC
>Mature Secondary Structure
MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAAL
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHH
KQAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNNA
HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
VIGEPLKPFRRAADAIEASGLEYTILRPEVVNKNWPPS
CCCCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]