| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is frsA
Identifier: 187733956
GI number: 187733956
Start: 243417
End: 244661
Strand: Direct
Name: frsA
Synonym: SbBS512_E0236
Alternate gene names: 187733956
Gene position: 243417-244661 (Clockwise)
Preceding gene: 187733181
Following gene: 187733287
Centisome position: 5.27
GC content: 53.01
Gene sequence:
>1245_bases ATGACACAGGCAAACCTGAGCGAAACCCTGTTCAAACCCCGCTTTAAACATCCTGAAACCTCGACGCTAGTCCGCCGCTT TAATCACGGCGCACAACCGCCTGTGCAGTCGGCTCTTGATGGTAAAACCATCCCTCACTGGTATCGCATGATTAACCGTC TGATGTGGATCTGGCGCGGTATTGACCCACGTGAAATCCTCGACGTCCAGGCACGTATTGTGATGAGCGATGCTGAACGT ACCGACGATGATTTATACGATACTGTGATTGGCTACCGTGGTGGCAACTGGATTTATGAGTGGGCCACCCAGGCGATGGT GTGGCAACAAAAAGCCTGTGCGGAAGAAGATCCGCAACTCAGTGGTCGACACTGGCTGCATGCGGCTACGTTGTACAACA TTGCCGCCTATCCTCATCTGAAAGGAGATGACCTGGCCGAGCAAGCGCAGGCTTTATCAAACCGCGCCTATGAAGAGGCC GCCCAGCGTCTGCCGGGCACGATGCGGCAGATGGAGTTTACCGTACCCGGCGGTGCGCCCATCACCGGCTTTTTGCATAT GCCGAAAGGCGATGGCCCGTTCCCGACAGTATTAATGTGTGGTGGTCTGGATGCGATGCAGACGGACTATTACAGCCTGT ATGAACGTTATTTTGCGCCGCGCGGCATTGTGATGCTGACTATTGATATGCCGTCGGTGGGCTTTTCTTCAAAATGGAAG CTCACCCAGGACTCCAGCCTGTTGCATCAGCACGTCTTAAAGGCGCTGCCTAACGTACCGTGGGTGGATCACACTCGCGT CGCGGCCTTTGGTTTCCGTTTCGGCGCTAACGTTGCCGTGCGTCTGGCATATCTTGAATCGCCGCGTCTGAAAGCGGTTG CCTGTCTTGGTCCGGTAGTTCATACCCTGTTGAGTGATTTTAAGTGCCAGCAACAGGTGCCGGAAATGTATCTTGACGTT CTGGCGAGTCGTTTGGGGATGCATGATGCTTCCGACGAAGCGTTACGCGTGGAGCTGAATCGCTATTCATTAAAAGTGCA AGGATTGCTGGGACGTCGCTGCCCAACGCCAATGTTATCAGGCTACTGGAAGAACGATCCGTTCAGCCCGGAAGAGGACT CACGCTTAATCACCTCATCATCTGCTGACGGTAAATTATTAGAGATCCCATTTTACCCGGTGTATCGGAATTTTGACAAA GGTCTTCAGGAAATCACCGGCTGGATCGAAAAACGCTTGTGTTAA
Upstream 100 bases:
>100_bases GGTCGCTAATCTTTTCAACGCCTGGCACTGCCGGGCGTTGTTCTTTTTAACTTCAGGCAGGTTACAATAGTTTCCAGTAA GTATTCTGGAGGCTGCATCC
Downstream 100 bases:
>100_bases AAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCC GAAGAGCAGATTGATCAAAA
Product: fermentation/respiration switch protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRGIDPREILDVQARIVMSDAER TDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIVMLTIDMPSVGFSSKWK LTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDV LASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFYPVYRNFDK GLQEITGWIEKRLC
Sequences:
>Translated_414_residues MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRGIDPREILDVQARIVMSDAER TDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIVMLTIDMPSVGFSSKWK LTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDV LASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFYPVYRNFDK GLQEITGWIEKRLC >Mature_413_residues TQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERT DDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAA QRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIVMLTIDMPSVGFSSKWKL TQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVL ASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFYPVYRNFDKG LQEITGWIEKRLC
Specific function: Displays esterase activity toward pNP-butyrate [H]
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0255 family [H]
Homologues:
Organism=Escherichia coli, GI1786434, Length=414, Percent_Identity=99.0338164251208, Blast_Score=857, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010520 [H]
Pfam domain/function: PF06500 DUF1100 [H]
EC number: NA
Molecular weight: Translated: 47042; Mature: 46911
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRG CCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCC IDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQL CCHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC SGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAP CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCC ITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIVMLTIDMPSVGFSSKWK EEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEE LTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVV ECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHH HTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHEEEEEHHHCCCCCCHHHC GYWKNDPFSPEEDSRLITSSSADGKLLEIPFYPVYRNFDKGLQEITGWIEKRLC CCCCCCCCCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRG CCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCC IDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQL CCHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC SGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAP CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCC ITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIVMLTIDMPSVGFSSKWK EEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEE LTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVV ECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHH HTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHEEEEEHHHCCCCCCHHHC GYWKNDPFSPEEDSRLITSSSADGKLLEIPFYPVYRNFDKGLQEITGWIEKRLC CCCCCCCCCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA