| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is cheW
Identifier: 187733786
GI number: 187733786
Start: 1984203
End: 1984706
Strand: Reverse
Name: cheW
Synonym: SbBS512_E2180
Alternate gene names: 187733786
Gene position: 1984706-1984203 (Counterclockwise)
Preceding gene: 187730257
Following gene: 187732383
Centisome position: 43.0
GC content: 51.79
Gene sequence:
>504_bases ATGACCGGTATGACGAATGTAACAAAGCTGGCCAGCGAGCCGTCAGGCCAGGAATTTCTGGTATTTACCCTTGGTGATGA AGAGTACGGTATTGATATCCTGAAAGTGCAGGAGATCCGTGGCTACGATCAGGTAACACGGATTGCGAACACGCCAGCGT TTATCAAAGGCGTCACGAATCTGCGCGGCGTTATTGTGCTGATTGTTGACTTACGAATTAAGTTCAGCCAGGTGGATGTG GACTATAACGACAACACGGTAGTTATCGTCCTGAATCTCGGACAGCGGGTGGTCGGCATCGTGGTTGACGGCGTCTCAGA CGTGCTTTCATTGACGGCGGAGCAAATTCGTCCGGCACCGGAATTTGCCGTGACGCTTTCAACAGAATATCTCACTGGAC TGGGCGCACTGGGCGACCGGATGTTGATTCTGGTGAACATCGAAAAACTGCTGAACAGCGAAGAGATGGCGCTGTTAGAT AGCGCGGCGTCAGAAGTGGCGTAA
Upstream 100 bases:
>100_bases GCAGCGTGGCACTGATTGTTGATGTCTCCGCCTTGCAGGCGATAAACCGCGAACAACGTATGGCGAACACCGCCGCCTGA ATGAGTAAAAAGGTAACAAT
Downstream 100 bases:
>100_bases TTCTCCCGATTTCCTCAATTGAAATGAACCCGATGATCTGCGCATCGGGTTTTTTATTTCAATTTCGCGGCGGGTGGCAT CAGCAATAAAGTTTCCCCCC
Product: purine-binding chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVLIVDLRIKFSQVDV DYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLD SAASEVA
Sequences:
>Translated_167_residues MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVLIVDLRIKFSQVDV DYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLD SAASEVA >Mature_166_residues TGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVLIVDLRIKFSQVDVD YNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDS AASEVA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=167, Percent_Identity=99.4011976047904, Blast_Score=326, Evalue=5e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 18100; Mature: 17969
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTN CCCCCCHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCHHHHHHHCCCCHHHHHHCC LRGVIVLIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAP CCEEEEEEEEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCCC EFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDSAASEVA CEEEEEEHHHHHHHCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure TGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTN CCCCCHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCHHHHHHHCCCCHHHHHHCC LRGVIVLIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAP CCEEEEEEEEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCCC EFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDSAASEVA CEEEEEEHHHHHHHCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]