| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is tauA
Identifier: 187733683
GI number: 187733683
Start: 276133
End: 277095
Strand: Direct
Name: tauA
Synonym: SbBS512_E0278
Alternate gene names: 187733683
Gene position: 276133-277095 (Clockwise)
Preceding gene: 187732785
Following gene: 187732597
Centisome position: 5.98
GC content: 55.76
Gene sequence:
>963_bases ATGGCAATTTCATCGCGTAACACACTTCTTGCCGCACTGGCATTCATCGCTTTTCAGGCACAGGCGGTGAACGTCACCGT GGCGTATCAAACCTCAGCCGAACCGGCGAAAGTGGCTCAGGCCGACAACACCTTTGCTAAAGAGAGCGGGGCGAGCGTGG ACTGGCGTAAGTTTGACAGCGGAGCCAGCATCGTGCGGGCGCTGGCTTCTGGCGACGTGCAAATCGGCAACCTCGGTTCC AGCCCATTAGCGGTTGCAGCCAACCAACAGGTGCCGATTGAAGTCTTCTTGCTGGCGTCAAAACTGGGTAACTCCGAAGC GCTGGTGGTAAAGAAAACTATCAGCAAACCCGAAGATTTGATTGGCAAACGCATTGCCGTACCGTTTATCTCCACCACCC ACTACAGCCTGCTGGCGGCGCTGAAACACTGGGGGATTAAACCAGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCG ATTATCGCCGCATGGCAGCGGGGTGATATTGATGGTGCTTATGTCTGGGCACCGGCGGTTAACGCCCTGGAAAAAGACGG CAAGGTGTTGACCGATTCTGAACAGGTCGGGCAGTGGGGTGCGCCAACGCTGGACGTCTGGGTGGTGTGCAAAGATTTTG CCGAGAAACATCCTGAGGTAGTGAAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGCAACCGTACATTGCTAACCCAGAC GCGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCGGAAGGTGACGTTCCGGGGCTGGT TAAGGGGAATACCTATCTGACGCCGCAGCAACAAACGGCAGAACTGACCGGACCGGTGAACAAAGTAATCATCGACACCG CGCAGTTTTTGAAAGAGCAGGGCAAGGTCCCGGCTGTAGCGAATGATTACAGCCAGTACGTTACCTCGCGCTTCGTGCAA TAA
Upstream 100 bases:
>100_bases GCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACA AGACTGGGGAGCAGACAATC
Downstream 100 bases:
>100_bases AAGGAGGCGCAGATGCTGCAAATCTCTCATCTCTATGCCGATTATGGCGGCAAACCGGCACTGGAAGATATCAACCTGAC GCTGGAAAGCGGCGAGCTAC
Product: taurine transporter substrate binding subunit
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKESGASVDWRKFDSGASIVRALASGDVQIGNLGS SPLAVAANQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPA IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVCKDFAEKHPEVVKAFAKSAIDAQQPYIANPD AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ
Sequences:
>Translated_320_residues MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKESGASVDWRKFDSGASIVRALASGDVQIGNLGS SPLAVAANQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPA IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVCKDFAEKHPEVVKAFAKSAIDAQQPYIANPD AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ >Mature_319_residues AISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKESGASVDWRKFDSGASIVRALASGDVQIGNLGSS PLAVAANQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAI IAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVCKDFAEKHPEVVKAFAKSAIDAQQPYIANPDA WLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG4521
COG function: function code P; ABC-type taurine transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=320, Percent_Identity=98.4375, Blast_Score=632, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 34226; Mature: 34095
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKESGASVDWRKFDS CCCCCCHHHHHHHHHHHHHCEEEEEEEEEECCCCCHHHHHCCCCHHHHCCCCCCHHHCCC GASIVRALASGDVQIGNLGSSPLAVAANQQVPIEVFLLASKLGNSEALVVKKTISKPEDL HHHHHHHHHCCCEEECCCCCCCEEEECCCCCCEEEEEEEHHCCCCCEEEEEHHHCCCHHH IGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAV HCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEECHHH NALEKDGKVLTDSEQVGQWGAPTLDVWVVCKDFAEKHPEVVKAFAKSAIDAQQPYIANPD HHHHHCCCEEECHHHHCCCCCCCCHHHHEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCCH AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQ HHHCCCHHHHHHHHHCCCCCCCCCCEEECCEEECCCHHHHHHCCCHHHHHHHHHHHHHHC GKVPAVANDYSQYVTSRFVQ CCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKESGASVDWRKFDS CCCCCHHHHHHHHHHHHHCEEEEEEEEEECCCCCHHHHHCCCCHHHHCCCCCCHHHCCC GASIVRALASGDVQIGNLGSSPLAVAANQQVPIEVFLLASKLGNSEALVVKKTISKPEDL HHHHHHHHHCCCEEECCCCCCCEEEECCCCCCEEEEEEEHHCCCCCEEEEEHHHCCCHHH IGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAV HCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEECHHH NALEKDGKVLTDSEQVGQWGAPTLDVWVVCKDFAEKHPEVVKAFAKSAIDAQQPYIANPD HHHHHCCCEEECHHHHCCCCCCCCHHHHEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCCH AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQ HHHCCCHHHHHHHHHCCCCCCCCCCEEECCEEECCCHHHHHHCCCHHHHHHHHHHHHHHC GKVPAVANDYSQYVTSRFVQ CCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]